KEGG   Staphylococcus lugdunensis N920143: SLUG_18850
Entry
SLUG_18850        CDS       T01951                                 
Name
(GenBank) conserved hypothetical protein
  KO
K16898  ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-]
Organism
sln  Staphylococcus lugdunensis N920143
Brite
KEGG Orthology (KO) [BR:sln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sln03400]
    SLUG_18850
Enzymes [BR:sln01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SLUG_18850
DNA repair and recombination proteins [BR:sln03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    AddAB pathway proteins
     SLUG_18850
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PDDEXK_1 UvrD_C_2 DEAD AAA_12 ResIII DASH_Spc19 ATP-synt_ab
Other DBs
NCBI-ProteinID: CCB54389
Position
complement(1987884..1991534)
AA seq 1216 aa
MIPVKPEGVIWTDAQWQSIYAKGQDVLVAAAAGSGKTAVLVERIIQRIIRDNVDVDRLLV
VTFTNLSAREMKHRVEQRIQEAALEDPNNTHLKNQRIKIHQAQISTLHSFCLKLIQQHYD
VLDVDPNFRTSSEAENILLLEQTIDETLEHYYDVLNSDFIELAEQLSKDRNDDDFRTIIK
SLYYFSIANPNPFEWLTQLVKPYQNEAQQDNLLQLLTDLSRIFLRAAQEALSKSYEIFTL
AEDTDKQIAVIEDEMAFMTKAFDGDMIQSDVIANHEFVSRFPALTKKIKEVNETMGDALV
EAKAYYDKYKSLVSKVQADYFSRSAQDLKRDMQRLAPRVNILADIVKDVITAFGQKKRSR
NILDFADYEHFALQILTNDDGSPSHIAEMYREQFAEILVDEYQDTNRVQEQILSCIKTGS
EADGNLFMVGDVKQSIYKFRQADPSLFIEKYQRFNAEGNGTGIRIDLSQNFRSRKEVLST
TNYLFKHMMDEEVGEISYDDAAQLYYGAPFDEVDHPVELRTLIEADKEHSELNGSEQEAE
YIVKQVKDILENKRIFDMKTGHYRQPTYKDIVILERSFSQARDLQQAFKDHDIPFHVNSR
QGYFEQTEVRLVLSFLRTIDNPLQDIYLVGLMRSVIYQFTEDELANIRVFSPNDDYFYQS
IVNYINHDLANKKLVKKLQNFIADIKMYQIYSQSNPVYQLIDKFYHDHYVIQYFSGLIGG
KGRRANLYGLFNKAIEFENSSFRGLYQFIRFIDELIDRGQDFGEENIVGPNDNVVKMMTI
HSSKGLEFPFVIYSGLTREFNKKDLREQVILNQKYGLGIDYYDIDKNMAYPSLSSVAYKA
ITEKEMISEEMRLIYVALTRAKEQLILIGRLKSTKKLEEYEKLAISGSHIAVNERLTAEH
PFELIYGILSKHKSYELTPDLMFENDIANLAESIRPNVNIIIDYFEDIIEANHQDMNEQR
SISDLNTLDTGNDDIKAKITQQLKFKYPNVINTTKPSKQSVSELKRQLETEESDTNYDRV
RQYRIGVATYERPRFMRHVTKRKANEVGTLMHTVMQHLPFKPERMTEEALEQYIDHLITQ
QIIEHDAKKDIKFPEIMTFIQSDLYLEIAEAEQIYRELPFVVNQAKVDNISDNHEDVAII
QGIIDLIYKKDNQYYFVDYKTDAFNRRKGMTDEEIGEQLKEKYRIQMQYYKNALETMLHT
EVKGSLYFFQFGRLSI
NT seq 3651 nt   +upstreamnt  +downstreamnt
atgataccagtcaagcccgaaggggtaatttggacagatgcgcagtggcaaagtatatat
gctaaaggtcaagatgtgttagttgcggccgctgccggctcagggaaaacggcagtttta
gtagaaagaattattcaacgtatcatcagagacaatgttgatgttgatcgattattggtg
gttacttttactaatttaagtgcacgtgaaatgaaacatagggtagaacaacgcattcaa
gaagcagcacttgaagatcctaataatacgcatttaaagaatcaacgcataaagatacac
caagctcaaatttctacattgcatagtttttgtttaaagctaatacaacagcattacgat
gtgttagatgttgatcctaattttagaacgagtagtgaagcagaaaacatcttactgtta
gaacagaccatagatgaaactttagaacactactatgatgtgttaaacagcgatttcatt
gaactagcagagcaattgtctaaggatagaaatgacgatgactttagaacaatcattaaa
tctctttattactttagtattgcgaaccccaatccttttgaatggttaacccaattagtg
aaaccataccaaaatgaagcacaacaagacaacttgttacaattgttgacagatttgtcg
cgtatttttttacgtgctgcacaagaggctttaagtaaaagctatgaaatatttacttta
gctgaagatacggacaagcaaatagctgtcattgaagatgaaatggcttttatgactaaa
gcctttgatggagatatgatacaaagtgatgtaattgcaaatcatgaatttgtcagtaga
tttcctgcattgactaaaaagataaaagaagtaaatgaaactatgggtgatgcacttgtt
gaagctaaagcatattacgataaatataaatcgcttgtatccaaagtccaagcagactat
ttctcacgcagtgcgcaagatttaaagcgagatatgcaaaggttggcaccacgagtaaat
atattagcagacattgttaaagacgttataactgcatttggtcaaaaaaaacgaagtcgt
aatatcctagactttgctgactatgagcattttgcgttacaaatattaacaaatgatgat
ggctcaccttctcatatcgcggagatgtatcgcgaacagtttgctgaaatattagtagat
gaataccaagataccaatcgcgtacaagaacaaatattatcctgcattaagactggttca
gaagcagacggtaatttatttatggtaggggatgtcaagcaatctatttacaaatttaga
caagcagacccaagtctatttattgagaaatatcaacgttttaatgcagagggtaacggc
acaggtatacgcattgatttgtcgcaaaacttccgatctagaaaagaagtgttaagtacc
actaactatttatttaagcacatgatggacgaagaagttggtgaaattagttacgatgat
gctgcacaattgtactatggtgcgccatttgatgaggtggatcatccagtagagctgcgt
acattgattgaagcagataaagaacatagtgaactaaatggctcagaacaagaagctgaa
tatattgttaaacaggtgaaagatattttagaaaataagcgtatatttgatatgaaaacg
ggtcactatcgtcaaccaacatataaagatattgttattttagaacgtagtttttcgcaa
gctagagacttgcaacaagcgtttaaagatcatgacataccctttcacgtgaacagtaga
caaggctatttcgaacaaacggaagtgcgattagttttatcatttttaagaacaatagat
aatcctttacaagatatttatttagtaggattgatgcgttcggtcatctatcaatttacc
gaagatgaattagctaatatacgtgtcttcagtcctaatgatgactatttctatcaatct
attgtgaactatattaaccatgatttggctaataaaaaattagtaaagaaactacaaaat
ttcatagctgatattaaaatgtatcagatttatagtcaaagtaatccagtttaccaactc
atagataagttttaccatgaccattatgttatccaatatttcagtggtttgattggtggt
aaaggacgacgggccaatctttatggattatttaataaggctatcgaatttgaaaattct
agttttagaggactttatcaatttattcgttttatagatgaactgattgaccgcggccaa
gattttggcgaagaaaatatcgtaggtcctaatgataatgtcgttaaaatgatgactatt
catagcagtaagggattagaatttccatttgttatttattcaggattaacaagggaattt
aataagaaagatttacgggaacaagttatcttaaaccaaaaatatggtttaggtatcgat
tattatgatattgataaaaatatggcatatccttcactgtcatctgttgcttataaagca
ataacagaaaaagaaatgatatcagaagaaatgcgtttaatttatgtggcattgacacgt
gcaaaggaacaacttattttaattggcagacttaaatctacaaaaaaacttgaagagtac
gaaaaattagctatttcaggttcacatatagctgttaatgagcgtttgacagcagaacat
ccttttgaacttatttatggtattttgtcgaagcataagtcctatgaactgacaccggat
ttaatgttcgaaaatgatattgcaaatttagcagaaagcataagaccaaacgtaaatatc
attattgattattttgaagatattattgaagctaatcatcaagatatgaatgagcagcgt
tctatttcggatcttaatacgttggatacaggcaacgatgatattaaggcgaaaattacg
caacagcttaagtttaaatatccaaacgtgattaataccactaagccttctaagcaatcc
gtatctgaattaaaacgacaactggaaactgaagaaagcgatacgaactacgatcgcgtt
cgacaatatcgcattggtgttgcgacatatgaacggccaagatttatgcgtcatgttacg
aagcgtaaagccaatgaagtaggaacattaatgcacaccgtcatgcaacatttgcctttc
aaacctgagcgtatgacagaggaagcattggagcaatatattgatcatttaatcacacaa
caaattattgaacatgatgctaagaaagacattaaatttccagaaataatgacgtttatt
caaagtgatttatatcttgaaatcgcagaagctgaacaaatttatcgtgaattacctttt
gttgtaaatcaagcaaaagttgataatatatcagataaccatgaagacgtagcgattatt
cagggtataattgatctaatttataagaaagataatcaatattactttgttgattataag
acagatgcttttaatagacgaaaaggtatgacagatgaagaaataggagaacaacttaaa
gaaaaatatcgcattcaaatgcaatattataaaaatgctttagaaaccatgctccatact
gaagtaaaaggttctttatatttcttccagtttggtagattatccatatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (18)   

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