KEGG   Shewanella loihica: Shew_2133
Entry
Shew_2133         CDS       T00489                                 
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
slo  Shewanella loihica
Pathway
slo00470  D-Amino acid metabolism
slo00550  Peptidoglycan biosynthesis
slo01100  Metabolic pathways
slo01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:slo00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    Shew_2133
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    Shew_2133
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    Shew_2133
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:slo01011]
    Shew_2133
Enzymes [BR:slo01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     Shew_2133
Peptidoglycan biosynthesis and degradation proteins [BR:slo01011]
 Precursor biosynthesis
  Amino acid ligase
   Shew_2133
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2
Other DBs
NCBI-ProteinID: ABO23999
UniProt: A3QEV1
Position
2479110..2480114
AA seq 334 aa
MNPINLLLLCGGGGDEHAISLLSANYFETSLAKLPHLNVLRVELDAKGQYQSKSGERCEL
TNRREIRFEDESLAPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGCDAEGSRNCFNK
ITAKMWFSALGIPNTPYLFLNQLDEQAIAQTTDALAKWGSVFVKAASQGSSVGCYRVDDA
AQIPAILADAFHYSPYVVVEKTIQARELEVAVYQYRGETVATLPGEVICAGGTFYTYDEK
YAADSKATTKVVAEVSDEIAQQIRAYAVKVFDGMKLRHLSRIDFFLTPEGEILLNEINTF
PGLTPISMFPKMLANHGDDFSQYLNEAILTGLNR
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgaatccgatcaaccttttacttttatgcggtggcggcggcgatgaacacgccatctcc
ctgctgtcggccaactacttcgagacctcgctggcgaaacttccccacctgaatgtgctg
cgggtcgaactcgatgccaagggacaatatcaaagcaaatcaggtgagcgctgtgagctg
accaatcgccgcgagatccgtttcgaagacgaaagcctggcgccctggccggtggattat
gtgatcccctgtattcacggctaccctggcgaaaccggcgacattcagtcctatttcgaa
ctcataaacctaccctatttcggctgtgacgccgagggctctcgcaactgtttcaacaag
atcaccgccaagatgtggtttagcgccctggggatccctaacaccccttacctcttcctg
aatcaactggacgagcaggcaattgcccagaccacagacgccctggccaagtggggctca
gtattcgtaaaggccgcctcacaaggctcctctgtgggctgttaccgggtcgatgacgcg
gcgcagatcccggccattctggccgatgcgtttcattattcgccctatgtggtggtagag
aaaaccattcaggcacgggagctggaagtcgccgtctatcaataccgaggcgagacggtc
gccaccctgcctggcgaggtgatctgcgccggtggcaccttctacacctatgatgagaag
tatgccgccgacagcaaggccaccactaaggtcgtggccgaagtcagcgatgagatagcc
cagcagatccgcgcctatgcggtaaaggtattcgatggcatgaagcttagacacctgtcg
cgcatcgatttcttcctcacgccagaaggcgagatcttactcaacgagatcaacaccttc
cccggcctgacgccgatttctatgttccctaagatgctggccaaccatggcgatgacttt
agccaatacctgaacgaagccattctgaccgggcttaatcgctaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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