KEGG T02740: M495

Serratia liquefaciens: M495_14090

Entry

M495_14090        CDS       T02740

Name

(GenBank) RNA helicase

K05591

ATP-dependent RNA helicase DbpA [EC:5.6.2.6]

Organism

slq Serratia liquefaciens

Brite

KEGG Orthology (KO) [BR:slq00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slq03009]
    M495_14090
Enzymes [BR:slq01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     M495_14090
Ribosome biogenesis [BR:slq03009]
Prokaryotic type
  rRNA helicases
   M495_14090

SSDB

Motif

Pfam:

DEAD Helicase_C DbpA ResIII CMS1 P-loop_SecA AAA_19

Other DBs

NCBI-ProteinID:

AGQ31558

Position

complement(2967652..2969034)

AA seq 460 aa
MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILKGQDVRAKAKTGSGKTAAFGI
GLLDKINVSQVAAQALILCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
TLLFSATYPSGIERISARVQREPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHY
QPSSCVVFCNTKRDCQSVYEALEARGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGLSGLAISLCTPQEMTRAHAIEEY
LQIRVNWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRPGDILGALTGEAGLTAAEVGK
IDIFPVHAYVAIRKASARKALQQLQQGKIKGKNCKVRLLK

NT seq 1383 nt +upstreamnt +downstreamnt
gtgagcacagtttctttttcttccctgccgctgccagccgaacagttggccaacctcaac
gaactggggtatgccgaaatgacgccggtgcaggctgccgcattgcccgccatcctgaaa
gggcaggacgtacgtgccaaagcaaaaaccggcagcggtaaaacggcggcgttcggcatt
ggcctgctggacaaaatcaacgtttcccaagtggccgctcaggcactgatcctgtgcccg
acgcgtgagctggcggaccaggtgagcaaagaattgcgtcgtctggcgcgcttcactcag
aacatcaaaattctgaccctgtgcgggggccaaccgatggggccgcagctcgattcgctg
gtacacgcgccgcatatcgtggtgggcacgccggggcgtattcaggaacacctgcgcaag
aaaacgctggtgctggatgaactgaaggtgctggtgctggacgaagccgaccgcatgctg
gacatgggctttgccgacgatatcgacgatgtgatcagctacacgccgccgcaacgtcag
acgctgctgttctccgcaacctatccgagcgggatcgaacgcatcagcgctcgcgtgcag
cgcgagccgttgaatgtggaagtggacgacggtgaagagcaaaccaccatcgaacaacgt
ttctacgaaacgacgcgcgatcaacgcccggcggtattagtgtcggcgattcgtcattac
caaccttcttcttgcgtagtgttctgcaacaccaaacgcgattgccagagcgtgtacgaa
gcgctggaagcgcgaggcattaatgtcctggcgctgcatggcgatctggaacagcgcgat
cgcgatcaggtgctggtgcgttttgccaaccgcagctgccgtgtgctggtagcaactgac
gttgctgcgcgcggtctggatattaaagagctggagttggtggtcaactacgagctggcg
ttcgatccggaagtgcacgtgcaccgcatcggccgtaccggccgtgccggcttgagcggc
ctggcgatcagcctgtgtacgccacaggaaatgacgcgtgcgcatgcgattgaagagtat
cttcagatcagagttaactgggccccggtgtccgagttaagcggtgcggggaacaccacg
ctggaagccgaaatggtcaccctgtgcatcgacggcgggcgtaaagccaagatccgtcct
ggcgatattctcggcgcactgaccggcgaggccgggttgacggcggcggaagtgggtaaa
atcgacatattcccggtgcatgcctacgtggcgatccgcaaggccagcgcgcgtaaggcg
ctgcagcagctgcagcaaggcaaaatcaagggtaagaactgcaaggtgcggttgttgaaa
taa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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