KEGG   Salinispira pacifica: L21SP2_1266
Entry
L21SP2_1266       CDS       T03013                                 
Name
(GenBank) DNA polymerase III polC-type
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
slr  Salinispira pacifica
Pathway
slr03030  DNA replication
slr03430  Mismatch repair
slr03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    L21SP2_1266
   03430 Mismatch repair
    L21SP2_1266
   03440 Homologous recombination
    L21SP2_1266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slr03032]
    L21SP2_1266
   03400 DNA repair and recombination proteins [BR:slr03400]
    L21SP2_1266
Enzymes [BR:slr01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     L21SP2_1266
DNA replication proteins [BR:slr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     L21SP2_1266
DNA repair and recombination proteins [BR:slr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     L21SP2_1266
SSDB
Motif
Pfam: RNase_T RNase_H_2 DNA_pol_A_exo1 DEDDh_C Rv2179c-like CAF1
Other DBs
NCBI-ProteinID: AHC14667
UniProt: V5WFR8
Position
1338958..1339524
AA seq 188 aa
MDMNASVYDLTFVAFDFETTGLYSGSDRIVEFGAVKFKGNSILGEFGELVNPGIPIPEDA
AKISGITDEMVAAKPAVEKMLDPFIEFIGDSILVAHNASFDMGFLRAALAGSGRSDIKNL
LIDTQQLAKRAYPGQKSYSLQNLAGFLNFPLNTAHRAVDDSIQCMKLFNACAQELSFMGE
ITLKEVLA
NT seq 567 nt   +upstreamnt  +downstreamnt
atggatatgaacgcatctgtatacgatctgacatttgtagcattcgattttgaaacaacc
ggtctttattccggaagcgacagaatagtggaattcggagcggtgaaattcaaaggcaac
agcattctcggcgagttcggtgaactggtgaatccgggtattccaattcctgaagatgcc
gcaaaaatatccggcatcaccgatgagatggttgctgcgaaacccgccgttgagaagatg
cttgatccatttattgaattcatcggggacagtatacttgtggctcacaatgccagcttc
gatatgggttttctcagggccgccttggcaggaagcggcaggagcgatatcaagaactta
ctcatagatacccaacagctggcaaaacgtgcatatcccggccaaaagagttactccctg
cagaatcttgccgggtttttgaactttcccctgaataccgcccatcgcgcagttgatgat
tccatccagtgcatgaagctgtttaatgcatgcgcccaggagctgagctttatgggggag
atcaccctcaaagaggtgctggcctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system