KEGG   Sideroxydans lithotrophicus: Slit_0667
Entry
Slit_0667         CDS       T01196                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
slt  Sideroxydans lithotrophicus
Brite
KEGG Orthology (KO) [BR:slt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:slt03009]
    Slit_0667
Enzymes [BR:slt01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     Slit_0667
Ribosome biogenesis [BR:slt03009]
 Prokaryotic type
  rRNA helicases
   Slit_0667
SSDB
Motif
Pfam: DEAD Helicase_C DbpA ResIII P-loop_SecA CMS1 AAA_22 YlmH_RBD
Other DBs
NCBI-ProteinID: ADE10907
UniProt: D5CNJ4
Position
complement(671609..673036)
AA seq 475 aa
MNKTTPPAPTPAAAATGRPFNELPLSPALLANLQQLEYRTMTPIQAESLPITLAGNDLIA
QAKTGSGKTAAFALPLLTNLNPRRFAVQAMVLCPTRELADQVTQELRRLARFADNIKILS
LVGGSTMRPQRDSLEHGAHIVVGTPGRIMDHLERGSLKLDALNTLVLDEADRMLDMGFYD
DIAFVVKHCPAQRQTMLFSATYPEGIARLAQKFMRKPQEVKLPEQHEGSKIRQRFYEVKH
EERLQAVATLLKHYRPVSTLAFCNTKQQCRDLLDVLHAEGIHALTLNGDMEQRERDQVLI
QFANRSCSVLVATDVAARGLDIAQLEAVINVDVTPDPEIHIHRIGRTGRADAEGWALSLA
SPADMHRISNIAKMVGSEPEWHTLESVKRANDKPLIPPMVTLQILGGRKEKIRPGDVLGA
LTGEAGFTREQVGKITVTDMSTYVAVARNIAREAVKRLSAGKVKGKTVKVRALED
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaataaaactaccccacccgccccaacacccgccgccgccgcgaccggccgccccttc
aacgaactgccgctgtcgcccgcgttgctggcgaacctgcagcagctcgaataccgcacg
atgacgccgatccaggccgagagcctgccgatcacgctggccgggaacgacctcatcgcg
caggccaagaccggcagcggcaagaccgccgcgttcgccctgccgctgctcaccaacctc
aacccgcgtcgcttcgccgtgcaggccatggtgctgtgccccacgcgcgagctggccgac
caagtgacgcaggagctgcgccggctggcgcgcttcgccgacaacatcaagatattgtcg
ctggtcggcggcagcaccatgcgcccgcagcgcgacagcctggagcacggtgcgcacatc
gtcgtcggcacgccgggccgcatcatggatcacctcgaacgcggcagcctcaaactggat
gcactcaatacgctggtgctggacgaagcggatcgcatgctggacatgggcttctacgac
gacatcgccttcgtggtgaagcactgcccggcccagcgccagaccatgctgttctcggcg
acctacccggaaggcatcgcgcggctggcgcagaaattcatgcgcaagccgcaggaggtg
aaactgccggaacagcacgagggcagcaagatccgccagcgcttctacgaggtgaaacac
gaagagcgcctgcaggccgtcgccaccctgctcaagcattaccgcccagtcagtacgctg
gccttttgcaacaccaagcagcaatgtcgcgatctgctcgacgtgctgcatgccgaaggc
atacatgcgctgacgctgaacggcgacatggaacagcgcgaacgcgaccaggtgctgatc
cagttcgccaaccgcagctgctcggtgctggtcgccacggacgtggccgcacgtggcctc
gacatcgcgcaactcgaagccgtcatcaatgtcgacgtcacgcccgatccggagatccac
atccaccgcatcggccgcaccggacgcgccgacgcagagggttgggcgctgagcctggcc
agcccggccgacatgcaccgcatctccaacatcgccaagatggtgggcagcgaaccggag
tggcacacgctggaatcggtgaagcgcgcaaacgacaaaccgctgatcccgccgatggtg
acgctgcagatcctcggcggccgcaaggaaaagatccgccccggcgatgtgctgggcgcc
ttgaccggcgaagccggattcacccgcgaacaggtcggcaagatcaccgtgacagatatg
tccacttacgttgccgtcgcgcgcaacatcgcgcgcgaggcagtgaagcgattgtcggca
ggaaaagtgaaaggcaagacggtgaaggtgcgcgcgctggaagattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (22)   

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