KEGG   Solanum lycopersicum (tomato): 101247901
Entry
101247901         CDS       T02665                                 
Name
(RefSeq) poly [ADP-ribose] polymerase 1 isoform X3
  KO
K24070  poly [ADP-ribose] polymerase 1 [EC:2.4.2.30]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101247901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sly03032]
    101247901
   03036 Chromosome and associated proteins [BR:sly03036]
    101247901
   03400 DNA repair and recombination proteins [BR:sly03400]
    101247901
Enzymes [BR:sly01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.2  Pentosyltransferases
    2.4.2.30  NAD+ ADP-ribosyltransferase
     101247901
DNA replication proteins [BR:sly03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    101247901
Chromosome and associated proteins [BR:sly03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    101247901
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     101247901
SSDB
Motif
Pfam: PARP PARP_reg zf-PARP PADR1_N WGR PADR1_Zn_ribbon BRCT BRCT_2 PTCB-BRCT BRCT_3 NPV_P10
Other DBs
NCBI-GeneID: 101247901
NCBI-ProteinID: XP_004235864
Position
3:68432218..68441739
AA seq 992 aa
MANPPKPWKAEYAKSSRSACKTCKSIIDKEVFRIGKMVQSTHFDGLMPMWHHANCILRKA
KQIKSLEDVEGVDQLRWEDQQKIREYVQTGGSSNIPPPAAVECGIEVSPASRASCRHCNQ
KIVKGEVRISSKPEGQRAKSLAWHHAKCFSEISSTTQVENLSNWDSLSAADQAAVLSLFK
SSTLTGNKTDPKEELAQESTSKAGAKRKKTSNNSEKSKVAKAELDVSTGKKVVDRNIDNV
KVELSKGSELESQLEAQTKALWALKDDLKKHVSTGELREMLEANDQESSGSELDLRDRCA
DAMHFGGLPKCPLCSGHLRYSGGMYRCHGYLSEWSKCSYSVTDIKRDKGKWKIPEKTSNE
FLLKWYKGQKSKKPERILLPATLSKETVSQAGNGLSQSSKGENLGDLKVALTGLSRDSRE
NWKSKIEEAGGQVHAKLKKDTDCLVVIGTWNDQDSEIKKARRLKVSVVREDYLVDSINRK
KKLPFDLYKLEANSETQSMKTVKVKGRSAVHESSRLQDTGHILEEKTSIYNTTLNMSDLS
SGINSYYILQIIEEDKGSDCYVFRKWGRVGNEKIGGDKLEEMSKSDAIQHFKRLFLEKTG
NSWEAWEQKKDFQKQPGRFYPLDIDYGVDKKTTSKRNFNDTNCKLAPPLMELMKILFNVE
TYRAAMMEFEINMSEMPLGKLSKRNIQKGFEALTEIQNLLSGTNHDPTVKETLLVDASNR
FFTVIPSIHPHVIKDEDDFKLKIKMLEALQDIEIASRLVGFDIDNDDSLDEKYKKLQCDI
SPLPHQSEDYRVIEKYLQNTHAPTHKEWVLEVEEVFSLERKGEYDKFKPCRDKLKNKMLL
WHGSRLTNFVGILSQGLRIAPPEAPATGYMFGKGIYFADMVSKSAQYCFTDRKNPVGFML
LSEVALGEVYELKAAKYMDKPPKGKHSTKGLGKTVPERSEFVNWRDEVVVPCGKPVTSNV
KNSELLYNEYIVYEAAQVKLQFLVKVRFNFKR
NT seq 2979 nt   +upstreamnt  +downstreamnt
atggcgaatcctccgaagccatggaaagctgagtatgcaaaatcatctcgttcagcatgc
aaaacttgcaaaagtattattgacaaagaagttttcagaattggaaaaatggtccaatct
actcattttgatggattaatgccgatgtggcatcatgctaactgcatcttgaggaaagca
aaacagataaaatcccttgaagatgttgaaggggttgaccagttgcggtgggaggatcag
cagaagataagggaatatgtacagactggtggatcctcaaacatccctcctccggctgca
gtggaatgtggtattgaagtatctccagcctcgcgtgcttcctgtcggcactgcaaccaa
aagattgttaaaggggaggtacgcatatcatcaaaacctgaaggtcaacgtgctaagtcg
ctggcatggcatcatgcaaagtgtttctctgaaatatcttcgactacccaggttgaaaat
ctatctaattgggatagcctctcagctgctgatcaggcagctgttctatccctgtttaag
agttctacattgacgggtaacaaaactgatcccaaggaggaactagcacaggaatcaaca
tctaaggctggtgctaaaaggaaaaaaaccagtaacaacagtgagaaatctaaggttgct
aaagccgaacttgatgtttctaccggcaaaaaagtggttgacagaaacattgacaatgtg
aaggttgaactctccaaaggatctgagctggagagccaactggaggcacagactaaagcc
ctatgggcactcaaggatgatctcaaaaagcatgtcagcacaggagagttgcgagagatg
cttgaagctaatgatcaggaatcttcaggatcagagcttgatcttcgagatcgctgtgct
gatgcaatgcattttggagggctccccaaatgtcccctttgttcaggacaccttcgatat
tctggaggcatgtacagatgccatggctatttgtcagaatggagcaagtgttcatactct
gtcaccgacataaaacgtgataaaggaaaatggaaaattcctgaaaaaaccagcaacgag
tttcttctcaagtggtataagggacaaaagtcaaaaaaaccagaaaggatactgcttccg
gctacactcagcaaggaaactgtgagccaggctggtaatgggctgtctcagtcttccaag
ggtgaaaacctaggggatctaaaagttgctttgacaggattgtccagagattccagggag
aactggaagagcaaaattgaggaagcaggtggacaggtgcatgccaagctgaagaaagac
acagattgcttagttgtaatagggacgtggaatgatcaagattctgagataaagaaggcc
aggagactgaaagtgtcagtagtcagggaggattatttggtggatagtatcaacagaaag
aaaaaacttccttttgacttgtataaattagaagctaatagtgagactcaaagcatgaaa
actgtcaaagtaaaagggaggagtgcggttcatgagtcatccagattgcaagatacagga
cacattcttgaggaaaagaccagcatttataatacgactttaaacatgtcagacctctca
agtggtattaatagttactacatccttcaaattattgaagaggacaaagggtcagactgt
tatgtttttcgcaaatggggtcgtgttggaaatgagaaaattggaggagacaagttagag
gagatgtctaaatcagatgcaatacaacattttaagcgtttgtttcttgagaagactggg
aattcatgggaagcatgggaacaaaagaaagatttccagaagcaacctggcagattttat
cctctggatattgattatggggttgacaaaaaaaccacctccaagagaaatttcaatgac
acaaattgcaaacttgcccctccattgatggagctgatgaagattctatttaatgttgag
acatacagggctgctatgatggaatttgagataaatatgtcggagatgccactgggaaag
ctgagtaaaaggaatatccaaaaaggttttgaggcattaacggagatacaaaatttgtta
agcggcactaatcatgatccaactgtcaaggagacccttcttgttgatgcaagcaatcgc
tttttcacagtcataccatctattcatcctcatgttattaaagatgaggatgattttaag
ttgaagataaaaatgctggaagctcttcaggacattgaaatagcttcacgacttgttggc
tttgacattgacaatgatgactcgctggatgagaagtataagaagctacagtgtgatata
tctccacttcctcatcaaagtgaagattatcgagttattgaaaagtatctccaaaatact
catgctcctacacataaggagtgggttctagaagtggaagaagtgttttctctcgaacgt
aaaggggaatatgacaagtttaaaccctgcagagataaactgaagaacaaaatgcttcta
tggcatggttcacgtttgacaaactttgtgggtatacttagccaaggactaagaattgct
cctccagaagcccctgctacggggtacatgtttggaaagggaatatactttgctgatatg
gtcagcaaaagtgcacaatattgcttcactgatcgcaagaaccctgttggatttatgctt
ctcagtgaagtagctttaggtgaggtttatgagctaaaggcagccaagtatatggacaaa
ccacctaaaggcaagcactctactaagggtctgggcaagacagtacctgagagatcagag
tttgtgaactggagggatgaagttgtggttccgtgtggaaaaccagtaacatcaaatgtt
aagaactctgagcttctgtacaatgaatacatagtctacgaagctgcccaagtaaagctg
cagttcttagtcaaagtgaggtttaatttcaagcggtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (11)   
   Pfam (11)   
All databases (53)   

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