KEGG   Solanum lycopersicum (tomato): 101250084
Entry
101250084         CDS       T02665                                 
Name
(RefSeq) cyclic nucleotide-gated ion channel 1
  KO
K05391  cyclic nucleotide gated channel, plant
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly04626  Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:sly00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04626 Plant-pathogen interaction
    101250084
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:sly04040]
    101250084
Ion channels [BR:sly04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   101250084
SSDB
Motif
Pfam: Ion_trans cNMP_binding
Other DBs
NCBI-GeneID: 101250084
NCBI-ProteinID: NP_001304069
UniProt: A0A0B4U3H6
Position
3:complement(1812126..1818294)
AA seq 708 aa
MNHRQEKFVRFQDWNSEKSSEGNFPYKDGAHRGRFGVFSNELHKSLESGSGRIKSIIHAL
SSCLSCLLVKSLGSEKKMLDPQGPFLQKWNKIFVLSCVIAISLDPLFFYIPVIDNNNKCL
HLDRKMEVTASVLRSITDIFYLFHIVLQFRTGFIAPSSRVFGRGVLVEDAWEIAKRYLSS
YFLIDILAVLPLPQVAILIVIPKLRGAKSLNTKTLLKFVVFFQYIPRLLRVYPLYKEVTR
TSGILTETAWAGAAFNLLLYMLASHVLGAFWYLFSIERESTCWQRACGNTSACHHSSLYC
DDDHTNFIKLLNDSCPIETPNTTLFDFGIFHDALNSGVVESMDFPQKFFYCFWWGLQNLS
SLGQNLETSTYVWEICFAVFISIAGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRRDAEQW
MSHRLLPEHLRERIRRYEQYKWQETRGVDEETLILNLPKDLRRDIKRHLCLALLMRVPMF
EKMDEQLLDALCDRLRPVLYTENSFIVREGDPVDEMLFIMRGKLLTVTTNGGRTGFFNSD
YLKAGDFCGEELLTWALDPHPSNNLPISTRTVQALSEVEAFALVADDLKFVASQFRRLHS
KQLRHTFRFYSQQWRTWAACFIQAAWRRHCRKKLEESLCEEENRLQDALARGGGSSPSLG
ATIYASRFAANALRALRHNTAKKARMTDRISPILLQKPAEPDFTAEDK
NT seq 2127 nt   +upstreamnt  +downstreamnt
atgaatcaccggcaagagaaatttgtgaggtttcaggattggaactcagagaaaagctca
gaggggaattttccatataaagatggagcacacaggggcagatttggagtgttctccaat
gaattacacaaatccctggaaagtggttctggaaggattaaaagcataatacatgcctta
agttcttgtttaagttgccttttggtcaaaagtttgggatcagaaaaaaagatgcttgat
cctcaaggaccttttcttcagaagtggaacaaaatatttgtattatcctgtgtaattgcc
atctccttggatcctttgttcttttacattccagtgattgataataacaacaaatgccta
catttggatagaaaaatggaggtcacagctagtgttttgcgttccatcactgatatcttt
taccttttccatattgtgcttcaatttcgtactggtttcattgccccttcatcacgtgta
tttggaagaggcgttttggttgaagatgcgtgggaaatagcaaagagatacttgtcctct
tacttcttaatagatattcttgcagttcttcctctaccacaggttgcaattttaattgtc
attcctaaattgcggggcgctaaatctttgaatacaaagactttgctgaaatttgtcgtc
ttcttccaatatattccgaggctccttcgagtataccctttatataaggaagtcactaga
acttctggcatactcactgaaacagcatgggctggagctgcgtttaatctccttctttat
atgcttgccagtcatgtacttggagccttttggtacctgttttctattgaacgtgaatct
acttgttggcaacgagcatgtggaaatacatctgcttgtcatcattcttcattgtactgt
gatgatgatcatacaaatttcataaaattgctgaatgactcatgtcctatagagacacca
aatacaacgctctttgattttggaatattccatgatgccctaaattctggtgttgtggag
tcaatggattttccacagaagttcttttattgtttctggtggggtttgcagaacttgagt
tcccttggtcaaaacctcgaaacaagtacctatgtctgggaaatttgctttgcagttttc
atttccatcgctggcttggtgctattttcatttctcattggaaacatgcagacgtatctg
cagtctacaacactcagactagaagagatgagggtgaaaagacgagatgcagagcagtgg
atgtctcaccgcttactccctgagcacctccgggagaggatcaggcgctatgagcaatac
aagtggcaggaaactaggggtgttgatgaagagactctgatcctcaacctgcctaaagat
cttagaagagatattaagcgtcatctttgtttggctttgctaatgagggttccaatgttt
gaaaaaatggatgagcaactcctggatgcactatgtgaccgtctcaggcctgtcctctac
acagagaacagcttcattgtgcgtgaaggtgatccggttgatgagatgctttttataatg
cggggcaaactattgaccgtaacgactaatggagggaggacagggttttttaactctgat
tatctaaaagctggtgatttttgtggagaagagcttcttacttgggctcttgatcctcat
ccatcaaataacctcccaatctcaacccgaactgtccaagcactctcagaagttgaagca
tttgctctagtggcggatgatttgaaatttgtagcctctcagttccggagacttcatagc
aagcaactccgccatacttttaggttttactcgcagcaatggagaacctgggcggcttgc
ttcatacaagcagcatggcgccgtcattgtaggaagaagctagaggaatccctttgcgaa
gaagaaaacagattacaagatgcattagcaaggggaggtggtagctcgccaagtttgggt
gctactatctatgcatcacgatttgctgctaatgcacttcgtgctttgcggcacaatact
gccaagaaagcaaggatgacagataggatatcacccattttgcttcagaaaccagctgaa
ccagattttactgctgaagataagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (30)   

Download RDF
DBGET integrated database retrieval system