KEGG   Solanum lycopersicum (tomato): 101256121
Entry
101256121         CDS       T02665                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 8B
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03020  RNA polymerase
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101256121
  09124 Replication and repair
   03420 Nucleotide excision repair
    101256121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101256121
   03400 DNA repair and recombination proteins [BR:sly03400]
    101256121
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     101256121
  RNA polymerase III system
   RNA polymerase III
     101256121
  RNA polymerase I system
   RNA polymerase I
     101256121
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101256121
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 101256121
NCBI-ProteinID: XP_010323267
UniProt: A0A3Q7EHY9
Position
1:complement(80316483..80322194)
AA seq 144 aa
MDAFHFDEIIKVVKVDADGKKYEKVSRIEAESSDGATSIQLDINSELYPMKRKELYRMVI
STTLMEGSAVTSYPPEGKSLLDKFEYIVHGLVYKVSMEGSGADKKVVVYVSFGGLQLMLK
SDALKTQKFKLDQKLFLLLRKMVK
NT seq 435 nt   +upstreamnt  +downstreamnt
atggatgcttttcactttgacgaaatcattaaggtggtgaaggtggatgctgatggcaaa
aagtatgaaaaagtttctcgcatagaagcagaaagtagtgatggtgcgacatcaatccag
ctagatatcaactcagaactatatcccatgaagcgaaaagagttgtacaggatggttata
tcaacgacactaatggaagggtcggctgtcactagctatcctcctgagggaaaatctctt
cttgataaatttgaatacatcgtgcatgggctggtatataaggtttcaatggagggatca
ggagctgacaaaaaagtggtggtttatgtctccttcggaggactccagctgatgctgaaa
agtgatgccctcaagacacagaagtttaagcttgatcagaagctctttcttcttctgagg
aagatggtgaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system