KEGG   Solanum lycopersicum (tomato): 101266576
Entry
101266576         CDS       T02665                                 
Name
(RefSeq) transcription initiation factor IIB-2 isoform X1
  KO
K03124  transcription initiation factor TFIIB
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101266576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101266576
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     101266576
 Prokaryotic type
  Archaeal type
    TFB
     101266576
SSDB
Motif
Pfam: TFIIB TF_Zn_Ribbon Cyclin_N Ribosomal_S27e RB_B zf-ribbon_3 A2L_zn_ribbon Zn-ribbon_8
Other DBs
NCBI-GeneID: 101266576
NCBI-ProteinID: XP_004249217
UniProt: A0A3Q7IKX0
Position
10:complement(61044087..61047830)
AA seq 313 aa
MDTYCSDCKRNTEVVFDHAAGDTVCSECGLVLESRSIDETSEWRTFADESGGDDPNRVGG
PVNPLLGDAALSTVISKGPNGSNGDGSLARLQNRGGDPDRAIVLAFKAIATMADRLSLVS
TIRDRASEIYKRLEDQKCTRGRNLDALVAACIYIACRQEGKPRTVKEICSIANGASKKEI
GRAKEFIVKQLKVEMGESMEMGTIHAGDYLRRFCSNLGMNHEEIKVVQETVQKAEEFDIR
RSPISIAAAIIYMITQLSDSKKPVLRADISVATTVAEGTIKNAYKDLYPHASKIIPEWYV
KDKDLKSLCSPKA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggatacgtactgttcggattgcaagaggaacacggaggtggtttttgaccacgccgcc
ggtgatacggtttgctcggagtgtgggctggtgttggaatctcgttcaattgatgaaaca
tctgagtggcgtacttttgctgatgagtcgggtggtgatgacccgaatcgtgttggagga
cccgttaacccgttactcggtgatgcggctctttctacagtgatatctaaagggcctaat
ggtagtaatggagatggttctcttgctaggttgcagaatcgtggtggtgatcctgaccgc
gcgattgttttggcttttaaggccattgctaccatggctgataggttgagccttgtttct
actataagggatcgagcaagtgagatatataagaggcttgaagaccaaaagtgtacaaga
ggcaggaatcttgacgctctggtcgctgcttgtatctacattgcgtgccgtcaagaaggc
aaaccccgcactgtaaaagaaatatgctcaattgccaatggagctagtaagaaggagatt
ggccgagcaaaagagttcattgtgaaacaattgaaggttgaaatgggagaatcaatggag
atgggaactatacatgctggggactatctgagacgtttttgttctaaccttggtatgaac
catgaagaaattaaggttgtccaagaaactgttcagaaggctgaagagtttgatataagg
aggagtcctatatcaattgctgcagcaataatatacatgatcactcaactttcagattca
aagaaacctgttctgcgagcagatatctcagttgcaaccactgttgcagaagggacaatc
aagaacgcgtacaaggatctttatcctcatgcttccaaaataattccagaatggtacgtg
aaagacaaggaccttaagagcctgtgcagtccaaaggcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (30)   

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