KEGG   Solanum lycopersicum (tomato): 101268032
Entry
101268032         CDS       T02665                                 
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
  KO
K03165  DNA topoisomerase III [EC:5.6.2.1]
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    101268032
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sly03032]
    101268032
   03400 DNA repair and recombination proteins [BR:sly03400]
    101268032
Enzymes [BR:sly01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     101268032
DNA replication proteins [BR:sly03032]
 Eukaryotic type
  DNA Topoisomerases
   101268032
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Bloom's syndrome complex (BTR)
     101268032
   FA (Fanconi anemia) pathway
     101268032
SSDB
Motif
Pfam: Topoisom_bac Toprim DUF5795
Other DBs
NCBI-GeneID: 101268032
NCBI-ProteinID: XP_004248022
Position
9:72376127..72387225
AA seq 864 aa
MAPKVFMVAEKPSIALSIASVLSGAQMSTRRGSTEVHEFDAMFLGSRAHYKVTSVIGHVF
SVDFPAAFQDWTTTNPSDLFQAPILKKETNPKAHICRHLSQEARGCTHLVLWLDCDREGE
NICFEVIECTGFHTSDGRRIYRARFSSVTEKDILKAMNSLAEPNRDEALSVDARQEIDLK
VGVAFTRFQTSYFNGKYGNLDARVISYGPCQTPTLGFCVDRFLQITMFKPEKFWMLHPYI
MYKGYELKLEWERSRLFDADVSAMFRNRIIEDRIMKVVRVSEKLESKARPSGLNTVNLLK
VASSALGFGPQLTMQLAERLYTQGFISYPRTESTAYPSSFDFKGTLGALVHNPVFGAYAQ
KLLTDNYIKPRAGTDAGDHPPITPMRSASEDSLGNDAWKLYQYICQHFLGTLSPDCKYRR
IKVEFESGGEQFQCVGQLATVKGFTSIMPWLAISEKNLPEFAVGEKIEVSKVELDEGDTS
PPGYLSESELISLMEKHGIGTDASISVHINNICERNYVQVQAGRRLAPTPLGISLIRGYQ
CIDSDLCLPDIRSFIEHQITLVAKGQADHSMVVQHVLEQFRRKFSYFVKQIDNMDALFEA
QFSPLSDSGRLLSKCGKCLRYMKYISTQPARLYCGTCEEVYYVPQKGTVKLYKELTCPLD
NFELLLCSMPGPEGKSFPLCPYCFNCPPFEGIDTFFGAPKTGDSTKLGKGVGMPCFLCPH
TTCPHSVIAQGVCACPECSGTLVLDPVSAPKWRLYCNTCNCLVSLPEGAHRISTTQEKCP
ECDSTIIEVDFNKKTTPLKDGATLHKGCILCDELLHSLVEMKHGRSFSRHGRRGRGRGRG
RGGYRGRGRGSNKQQDPKMSFRDF
NT seq 2595 nt   +upstreamnt  +downstreamnt
atggctccaaaagttttcatggtagcagagaagcctagcattgctttatcgattgcctca
gtactatctggtgctcaaatgtcaacacgaagaggtagtacagaagtccatgagttcgat
gcgatgtttcttggatcacgtgcacattataaagtgacttcagtgattggtcatgttttc
agcgtagattttccagcagcttttcaagattggacaactacaaatccttcagatcttttc
caggcaccgatacttaagaaggaaacaaaccccaaggctcatatttgtaggcatctaagc
caggaagctcgtggttgtacacatttggtgctatggttggactgtgatcgtgaaggagaa
aatatatgctttgaagttatagagtgcactggatttcacacaagcgacggtagaagaatt
taccgtgctcgattctcttctgttactgaaaaagatattctgaaggcaatgaatagccta
gctgaacccaacagagatgaggcattgtctgtagatgcacggcaagagattgatttgaaa
gttggagttgcatttacacgtttccagactagttatttcaatgggaaatatggcaatctt
gatgcaagggttatctcctatgggccatgtcaaactcctacgcttgggttctgtgtggat
cgtttcctgcaaattactatgttcaagccagaaaagttttggatgctgcatccgtacatt
atgtacaaggggtatgaactcaagttagaatgggaacgtagcaggttgtttgatgctgat
gtttctgcaatgtttcggaacagaataatagaggataggattatgaaagttgttcgtgta
tctgaaaaactggaatccaaagctcgtccttctggtctaaacacagtaaatcttctgaag
gtagcttcaagtgcactgggctttggtccccagttaactatgcaattggctgagcgtctg
tatactcaaggttttatcagctatccacgtacagaaagcacagcatatccttcttctttt
gacttcaaaggaacactaggggcgttggtgcataatcctgtatttggtgcttatgcgcaa
aagcttttaactgataattatattaagccacgggcaggaactgatgcaggcgatcatcct
ccgataactccgatgcgttctgctagtgaggatagtttggggaatgatgcatggaagttg
taccagtacatctgccagcattttttgggaactctctctccagattgcaaatatagaagg
ataaaagttgaatttgaaagtggaggagagcaatttcagtgcgttgggcagcttgccaca
gtcaaaggattcacctctattatgccatggctggctattagtgagaagaatcttcctgag
tttgctgtaggagagaaaatcgaggtttctaaagttgaactagatgagggggacacttcg
cctccgggttatctcagcgaaagtgagctgatctctttgatggagaaacatggtattgga
acagatgcgtcaatctctgtgcatattaacaacatatgcgaacgcaattatgtccaggta
caagctgggcggcgattggctccaactcccctgggtatcagcttgataagagggtatcaa
tgcatagattctgatctctgtttgcctgacatacgaagtttcattgagcaccagatcact
ttggtagctaaaggtcaagcagatcattcaatggttgtgcagcatgtactagaacaattc
agaaggaagttcagttattttgttaagcagattgataacatggacgcactatttgaagcc
caattttctccactttcagactctggacgtctcctcagtaaatgtggcaaatgcttgcga
tatatgaaatacatatctactcaaccagctcgactgtactgtggtacctgtgaggaagtc
tattatgtacctcagaagggtacagtcaagctatacaaggagcttacttgcccccttgat
aatttcgagctgttgctatgtagcatgcctggtcccgaaggcaagtcgttccctctctgt
ccttattgcttcaactgtcccccgtttgaaggcatagatacattttttggcgctcctaaa
actggtgattcaaccaagttgggaaagggagtcggaatgccttgcttcctctgtcctcac
accacatgtccacattctgtgatcgcacaaggcgtttgtgcctgtccagaatgcagtggt
acacttgttcttgatcctgtcagcgctccaaaatggaggctctactgcaacacgtgcaat
tgtcttgtatccttgcccgaaggagctcatcggatttctacaactcaagagaagtgtcct
gaatgtgattccactatcatagaagtcgatttcaacaagaaaacaacgcccttgaaagat
ggagctacactccataagggttgtattctttgcgacgagctgctgcattcacttgtggaa
atgaaacatggaagatcgttttctaggcatggcaggagaggaagaggtagaggaagagga
agaggaggttatcgcggaagaggacggggcagcaacaaacaacaagacccaaaaatgagt
ttccgagatttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (29)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (3)   
   Pfam (3)   
All databases (48)   

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