KEGG   Streptomyces avermitilis: SAVERM_2501
Entry
SAVERM_2501       CDS       T00126                                 
Symbol
nei1
Name
(GenBank) putative endonuclease VIII and DNA N-glycosylase with an AP lyase activity
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
sma  Streptomyces avermitilis
Pathway
sma03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SAVERM_2501 (nei1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sma03400]
    SAVERM_2501 (nei1)
Enzymes [BR:sma01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     SAVERM_2501 (nei1)
DNA repair and recombination proteins [BR:sma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     SAVERM_2501 (nei1)
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: BAC70212
NITE: SAV2501
UniProt: Q82KA2
Position
3052491..3053333
AA seq 280 aa
MPEGDTVYQAARRLHSALAGKVLTRSDLRVPKFATADLTGRTVLDVTPRGKHLLTRIEGG
LTLHSHLRMDGSWKVYAPGQRWSGGPAHQIRAIFGTADRTSVGYRLPVLELLRTADEHRA
VGHLGPDLLGPDWDPDRARENLLRDPARPLGEALLDQRNLAGIGNVYKSELCFLLRATPW
LPVGDLPAEHLAQLPALAKKLLETNRDRPARSTTGRREQRLFVYGRAPRPCLRCGTPVRV
ADQGDGSRERPTYWCPACQPGPTPAPGAHARRPSRPRITN
NT seq 843 nt   +upstreamnt  +downstreamnt
atgcccgaaggcgacaccgtctaccaagccgcgaggcgtctgcacagcgccctcgcgggc
aaggtactgacccgttccgacctccgggtgccgaaattcgccacggccgacctcaccggc
cgcaccgtactggacgtcaccccccgcggaaagcacctcctcacccgcatcgagggcggc
ctcaccctgcactcccatctgcggatggacggttcctggaaggtgtacgcgccgggccag
cgctggagcggcggccccgcacaccagatccgggcgatcttcggcaccgcggaccgcacg
tccgtgggctaccgcctccccgtcctcgaactgctccgcaccgccgacgaacaccgcgcc
gtcggccatctgggccccgacctcctgggccccgactgggaccccgaccgggctcgggag
aacctcctccgcgacccggcccgccccctcggcgaggccctcctcgatcagcgcaacctc
gccggcatcggcaatgtctacaagagcgagctgtgcttcctgctccgggccactccatgg
ctccccgtcggtgacctcccggccgagcacctcgcccaactccccgccctcgccaagaaa
ctcctggagaccaaccgcgaccgcccggcgcgcagcaccacgggccgccgcgagcagagg
ctcttcgtgtacggccgcgcaccccgcccctgtctgcgctgcggcacccccgtccgggtg
gccgaccagggcgacggttcccgcgagcgccccacctactggtgcccggcctgccagccg
gggcccactccggccccgggcgcccacgcacgaaggccaagccggccacgtatcactaat
tga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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