KEGG   Streptomyces avermitilis: SAVERM_2553
Entry
SAVERM_2553       CDS       T00126                                 
Symbol
nusA
Name
(GenBank) putative transcriptional termination/antitermination factor
  KO
K02600  transcription termination/antitermination protein NusA
Organism
sma  Streptomyces avermitilis
Brite
KEGG Orthology (KO) [BR:sma00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sma03021]
    SAVERM_2553 (nusA)
   03009 Ribosome biogenesis [BR:sma03009]
    SAVERM_2553 (nusA)
Transcription machinery [BR:sma03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     SAVERM_2553 (nusA)
Ribosome biogenesis [BR:sma03009]
 Prokaryotic type
  rRNA transcription factors
   SAVERM_2553 (nusA)
SSDB
Motif
Pfam: KH_5 NusA_N S1 KH_1 KH_2
Other DBs
NCBI-ProteinID: BAC70264
NITE: SAV2553
UniProt: Q82K51
Position
complement(3132616..3133602)
AA seq 328 aa
MDIDMSALRGLVREKEISFDLLVEAIESALLIAYHRTEGSRRHARVELNRETGHVTVWAK
EDPEDLEEGQEAREFDDTPSGFGRIAATTAKQVILQRLRDAEDDATLGEYAGREGDIVTG
VVQQGRDPKNVLVDIGKLEAILPVQEQVPGETYQHGLRLRSYVVRVAKGVRGPSVTLSRT
HPNLVKKLFALEVPEIADGSVEISAIAREAGHRTKIAVRSTRSGLNAKGACIGPMGGRVR
NVMAELNGEKIDIVDWSDDPAEMVANALSPARVSKVEVVDLAARSARVTVPDYQLSLAIG
KEGQNARLAARLTGWRIDIRPDTEQSGD
NT seq 987 nt   +upstreamnt  +downstreamnt
gtggacatcgacatgagcgccctgcggggcttggtgcgggagaaggagatctccttcgac
ctgctggtcgaggcgatcgagtcggccctcctcatcgcctaccaccgtaccgagggaagc
cgccgccacgcgcgcgtggagctcaaccgggaaaccggccacgtgacggtgtgggcgaag
gaggaccccgaggacctggaggaggggcaggaggcgcgcgagttcgacgacacgccgtcc
ggcttcggccgtatcgccgccaccaccgccaagcaggtcatcctgcagcgcctgcgggac
gcggaggacgacgccacgctcggcgagtacgccgggcgcgagggcgacatcgtgacgggc
gtggtccagcagggccgcgacccgaagaacgtgctcgtcgacatcggcaagctggaagcc
atcctgcccgtgcaggaacaggtacccggcgagacgtaccagcacggcttgcgccttcgc
tcgtacgtcgtccgggtggcgaagggcgtgcgcggtccgtccgtcaccctgtcccgcacc
caccccaatctggtgaagaagctcttcgcgctggaggtgccggagatcgccgacggttcc
gtcgagatctccgccatcgcccgcgaggccggccaccgcaccaagatcgccgtccgctcc
acccgatcgggcctgaacgccaagggcgcctgcatcggccccatgggcggtcgcgtgcgc
aacgtgatggccgagctgaacggtgagaagatcgacatcgtcgactggtcggacgacccg
gccgagatggtggcgaacgcgttgtccccggcccgggtctccaaggtcgaggtcgtcgac
ctcgcggcccgctccgcgcgcgtgacggtccccgactaccagctgtcgctggccatcggc
aaggaagggcagaacgcccggctcgcggcccggctcaccgggtggcggatcgacatccgc
ccggacaccgagcagagcggcgactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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