KEGG   Streptomyces malaysiensis: SMALA_2602
Entry
SMALA_2602        CDS       T05189                                 
Name
(GenBank) hypothetical protein
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
smal  Streptomyces malaysiensis
Pathway
smal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMALA_2602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smal03019]
    SMALA_2602
   03009 Ribosome biogenesis [BR:smal03009]
    SMALA_2602
Enzymes [BR:smal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     SMALA_2602
Messenger RNA biogenesis [BR:smal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SMALA_2602
Ribosome biogenesis [BR:smal03009]
 Prokaryotic type
  rRNA processing factors
   SMALA_2602
SSDB
Motif
Pfam: RNase_E_G
Other DBs
NCBI-ProteinID: ATL82836
UniProt: A0A291SPL3
Position
complement(3304360..3308370)
AA seq 1336 aa
MSEAEVTTSSAPAIPADQIAVAEAASEPVAAGAAMATASASAAGADPESAAPPARTRRRV
ARKATSPAGSPEAAETVVSADAGRGGEETEAAEPVSEAVSEAAPEAAPPARTRRRATRKV
TAPAGAPAEAEVVEPEEPEESEEAEESAAASEAEAEAETVPAAAARTRRRATRKATAPAG
PPQAETADADVSSTAAAGGSGDETTAPAAVAADAPADEAPRTRTRRRTTRKTTAPADAPV
EPERAEESAAAAEAEAEAETVPAAAARTRRRTTRKATAPAGAPAEAEAPEEPAAEERRGE
SAEESAGAQAEEAPRTRTRRRAVRGTVPAAEEPSGAPEAQGAEPEAGAPAAEAASEPEPA
PRSRRRAARPPTAVFQAPVFTEPVFQTPESAAAEAAAALEGADDADEDEDQPTAEAAEAV
EPETSAGRRRRRRRGAPAEEHPEPEETEAAESEAETEAESGHPEGEHGEEEPGDRPARRR
RRGGRRRRRGETAEGAEGAEGRSEGETGERYEDESAAEGEGAEEQGEGRDESGAESGESG
GSTSSRRRRRRRRRSGEAAEAETTGGDDPERTVVKVREPRERRGKEAESSADEVQSIKGS
TRLEAKKQRRREGREQGRRRVPIITEAEFLARREAVERVMVVRQNGDRTQIGVLEDNVLV
EHFVNKEQATSYVGNVYLGKVQNVLPSMEAAFVDIGKGRNAVLYAGEVNFEALGLANGPR
RIETALKSGQSVLVQVTKDPIGHKGARLTSQVSLPGRYLVYVPEGSMTGISRKLPDTERA
RLKQILKKIVPEDAGVIVRTAAEGASEDELSRDVARLQAQWEEIKKKAKNGGAPSLLYGE
PDMTVRVVRDIFNEDFSKVIVSGDDAWQTIHGYVSHVAPDLADRLQKWTSDVDVFATYRI
DEQLMKALDRKVWLPSGGSLVIDRTEAMVVIDVNTGKFTGQGGNLEETVTRNNLEAAEEI
VRQLRLRDLGGIIVIDFIDMVLESNRDLVLRRLLECLGRDRTKHQVAEVTSLGLVQMTRK
RVGQGLLESFSESCVHCNGRGVIVHMDQASAAGGGGGGGKRKKKKSAAGAGQQPAEQEPA
AVAGAEAEPEDVTEAAAEIAAEATQPKPLPEPVFAADEELYSSAAEAEAAATRGRTRRRA
TRKVSAPAGAPKTAKEPEGVVVVVADEPREAAEPEPEAAAAAPASASAEELEAPIEGVPA
PRTRRRATRKVSAPAGSPTGSEEAAVVVVSGSSAEPEPQSEPEARSESEAAPESASAEGE
AETEAPAKKRTARKAAKKAPAKKATAKKTAEKKTAAKKTAAKKTTAKKATAKKTAAKKTA
AAEQQTPQSVSAAADD
NT seq 4011 nt   +upstreamnt  +downstreamnt
gtgagcgaggccgaggtcaccacgtcctccgcaccggccataccggccgatcagatcgcc
gtcgccgaggccgcttccgagcccgtcgccgccggtgccgccatggccaccgcgagcgcg
tccgcggccggggccgaccccgaatccgccgctccacccgcccgtacgcggcgccgggtg
gcgcgcaaggcgacgtccccggcgggttcgccggaggccgcggagaccgtggtgtcggcc
gatgccgggcgtggcggcgaggagaccgaagccgcggagcccgtgtcggaagccgtgtcg
gaagccgcccccgaggccgctccgcccgcccgtacgcgccgccgtgcgacccgtaaggtg
accgctccggccggtgcgccggcggaggcggaggtcgtggagccggaggagcccgaagag
tccgaggaagccgaggagtccgcggccgcttctgaggccgaggccgaggcggagaccgtg
cccgcggcggccgcccgtacgcgccgccgtgcgacccgtaaggcgacggcccccgccggt
ccgccgcaggcggagaccgccgacgcggacgtgtcgtccacggcggccgctggtggcagt
ggcgacgagaccacggccccagccgcagtcgcggccgatgccccggccgacgaggccccg
cgtacccgtacgcgccgtcgtacgacccgtaagacgaccgctccggcggacgcccccgtg
gagccggagcgggccgaggagtccgcggccgctgcggaggccgaggccgaggcggagacc
gtgcccgcggcggccgcccgtacccgccgtcgtacgacccgtaaggcgaccgctcccgcc
ggagcgcccgcggaggccgaggctcccgaagagcccgccgccgaggagcggcggggcgag
agtgccgaggagtccgccggtgcgcaggccgaggaggcgccgcgcacccgtacccgccgc
cgtgccgtccggggcaccgtccccgccgccgaggagccgagtggcgctccggaggcgcag
ggtgccgagcccgaggccggggccccggccgccgaggccgcttccgagccggagcccgcg
ccccgttcgcggcgccgggcggcccgcccgccgacagccgtgttccaggcgcccgtcttc
accgagcccgtcttccagacgccggagagcgccgccgccgaggccgccgccgcgctggag
ggcgccgacgacgcggacgaggacgaggaccagccgaccgccgaggccgccgaggccgtc
gagcccgagacgtctgccggccgtcgtcggcgccgccgccgtggtgcgcccgccgaggag
cacccggagcccgaggagaccgaggccgccgagtccgaggccgagaccgaggccgagtcc
ggccaccccgagggcgagcacggcgaggaggagccgggcgaccgtccggcccgtcgccgc
cgccgtggcggacgtcgccgccgccggggcgagaccgccgagggcgctgagggcgccgag
gggcgttccgagggcgagaccggtgagcgctacgaggacgagtcggccgccgagggcgag
ggcgccgaggagcagggcgagggccgcgacgagtcgggcgccgagtccggtgagtccggc
ggctccaccagcagccgccgtcgccgtcgccgccgccgtcgcagcggcgaggccgccgag
gcggagacgacgggcggcgacgacccggagcgtacggtcgtcaaggtccgcgagccccgg
gagcggcgcggcaaggaagccgagtccagcgccgacgaggtgcagtcgatcaaggggtcg
acgcgtctggaggccaagaagcagcgccgccgcgagggtcgtgagcagggccgccgccgg
gtcccgatcatcaccgaggccgagtttctggcccgccgcgaggcggtcgagcgggtcatg
gtcgtccggcagaacggcgatcgcacccagatcggcgtgctggaggacaacgtcctcgtc
gagcacttcgtcaacaaggagcaggcgaccagctacgtcggcaacgtctacctgggcaag
gtccagaacgtgctgccgtcgatggaggccgccttcgtcgacatcggcaagggccgcaac
gccgtgctgtacgcgggcgaggtgaacttcgaggcgctggggctcgccaacgggccgcgc
cgcatcgagaccgcactgaagtccggccagtccgttctggtgcaggtgaccaaggacccg
atcggccacaagggcgcccggctgaccagccaggtctccctcccgggccgctatctggtc
tatgtgcccgagggctcgatgaccggtatcagccgcaagctgcccgacaccgagcgggcg
cggctgaagcagatcctcaagaagatcgtccccgaggacgcgggtgtgatcgtccgcacc
gccgccgagggcgcgagcgaggacgagctctcccgcgacgtcgcccggctccaggcgcag
tgggaggagatcaagaagaaggcgaagaacggcggcgccccgtcgctgctctacggcgag
cccgacatgaccgtccgggtcgtccgcgacatcttcaacgaggacttctccaaggtgatc
gtcagcggtgacgacgcctggcagaccatccacggctatgtctcgcatgtggcgcccgac
ctcgccgaccggctccagaagtggacctcggacgtcgacgtcttcgccacctaccggatc
gacgagcagctgatgaaggcgctggaccgcaaggtctggctgcccagcggcggttcgctg
gtgatcgaccggaccgaggcgatggtcgtcatcgacgtcaacaccggcaagttcaccggt
cagggcggcaacctcgaggagacggtcaccaggaacaacctggaggcggccgaggagatc
gtgcgccagctgcggctgcgcgacctcggcggcatcatcgtgatcgacttcatcgacatg
gtgctggagtccaaccgggatctggtgctgcgccgactgctggagtgcctgggccgggac
cgtacgaagcaccaggtggcggaggtcacctcgctcgggctggtccagatgacccgtaag
cgggtcggccaggggctgctggagtccttctccgagtcctgtgtgcactgcaacggccgc
ggcgtgatcgtccacatggaccaggcgtcggccgccggtggcggtggcggcggtggcaag
cgcaagaagaagaagtccgcggccggtgccggtcagcagccggccgagcaggagccggcc
gccgtggccggggcggaggccgagcccgaggacgtcaccgaggcggcggccgagatcgcg
gcggaggccactcagccgaagccgctgcccgagccggtcttcgcggccgacgaggagctg
tacagcagcgccgcggaggccgaggccgccgcgacccgtgggcgtacccgccgccgtgcc
acccgtaaggtgtccgccccggcgggtgccccgaagacagccaaggagcccgagggcgtg
gtggtcgtggtggccgacgagccgagggaagcggccgagccggagccggaggcggccgcc
gcggcccccgcttccgcttccgccgaggagctggaggccccgatcgagggcgttcccgcg
ccgcgtacgcgccgccgtgcgacccgtaaggtgtccgcccccgcgggctcgccgacgggt
tccgaggaggcggccgtggtggtcgtgagcgggtcttcggccgagccggagccgcagtcc
gagccggaagcgcggtccgagtcggaggcggcgcccgagagcgcgtccgccgagggcgag
gccgagaccgaggcgccggcgaagaagcggaccgcccgtaaggccgccaagaaggctccg
gccaagaaggcgacggccaagaagaccgccgagaagaagacggcggcgaagaagacggcc
gccaagaagaccacggccaagaaggcgaccgccaagaagacggcggcgaagaagaccgcg
gcggcggagcagcagactccgcagtcggtctcggcggcggccgacgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

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