KEGG   Streptomyces malaysiensis: SMALA_3353
Entry
SMALA_3353        CDS       T05189                                 
Name
(GenBank) ATP-dependent DNA helicase PcrA
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
smal  Streptomyces malaysiensis
Pathway
smal03420  Nucleotide excision repair
smal03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:smal00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SMALA_3353
   03430 Mismatch repair
    SMALA_3353
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smal03400]
    SMALA_3353
Enzymes [BR:smal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SMALA_3353
DNA repair and recombination proteins [BR:smal03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SMALA_3353
   MMR (mismatch excision repair)
    Other MMR factors
     SMALA_3353
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_11 ResIII DEAD
Other DBs
NCBI-ProteinID: ATL83587
UniProt: A0A291SRU0
Position
complement(4321484..4323955)
AA seq 823 aa
MSSLFDDSFLADLGPPSDEEQPPPPEDSAHPGHGGAEDVPHHLFSGGFDAPVPRESHYRD
GAARSVVDPSALLQGLNEQQRAAVEHTGSPLLIVAGAGSGKTRVLTHRIAYLLGARGTHP
GQILAITFTNKAAGEMKERVEELVGPRANAMWVSTFHSACVRILRRESKKLGFTSSFSIY
DAADSKRLMSLVCRDLDLDPKRFPPKSFSAKISNLKNELIDEETFAGQAADGFEKTLAEA
YVMYQARLREANALDFDDIIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYTLV
RELVGTGTDETPAAELCVVGDADQSIYAFRGATIRNILQFEEDYPSARTILLEQNYRSTQ
TILSAANAVIERNENRRPKNLWTDAGAGTEITGYVADTEHDEAQFVADEIDRLTDADDAR
AGDVAVFYRTNAQSRVFEEVFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLANPEDAVP
LRRILNVPKRGIGERAEAMIDALALREKITFPQALRRVDEAYGMAARSANAVKRFNTLME
ELHTIVESGAGPATVLEAVLERTGYLAELQTSTDPQDETRIENLQELAAVALEFEQDRGE
NPGTLADFLEQVALVADSDQIPDEDTEGSGVITLMTLHTAKGLEFPVVFLTGMEDGVFPH
MRALGQTKELEEERRLAYVGITRARERLYLTRSTMRSAWGQPAYNPPSRFLEEIPDQYVR
WRRTGPATPSASMSGVASTPPSGLSSGLSSSRSRTGGSGFATRRASERPVVALAIGDRVT
HDSFGLGTVVAVKGSGDNAEATIDFGDEKPKRLLLRYAPVEKL
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgagcagcctctttgacgacagcttcctggcggacctcgggcctccctcggacgaggag
cagcccccgccgcccgaggattcggcgcaccctggccacggcggtgccgaggatgtgccg
catcacctcttcagcggcggattcgacgcgcccgtgccccgggagtcccattaccgggac
ggcgcggcgcggtccgtggtggacccgtccgccctgctccaggggttgaacgagcagcag
agggccgccgtggagcacaccggctcgccactgctgatcgtcgcgggcgccggttcgggc
aagacccgggtgctcacccaccgcatcgcgtatctgctcggcgcccgcggcacacacccc
ggccagatcctcgccatcacctttaccaacaaggcggcgggcgagatgaaggagcgggtc
gaggagctcgtcggcccgcgggccaacgccatgtgggtgtccaccttccacagcgcctgc
gtccgcatcctgcgccgggagtcgaagaagctgggcttcacctcgtcgttctcgatctac
gacgccgccgactccaagcggctgatgtcgctggtctgccgggatctggacctcgacccc
aagcggttcccgccgaagtccttcagcgccaagatctccaacctcaagaacgagctgatc
gacgaggagaccttcgccggacaggcagcggacggctttgagaagaccttggccgaggcg
tatgtgatgtaccaggcgcggctgcgcgaggccaatgcgctggacttcgacgacatcatc
atgaccacggtcaatctgctccaggcgttcccggacgtcgcggagcactaccgccgccgc
ttccggcacgtcctggtggacgagtaccaggacaccaaccacgcgcagtacacactcgtg
cgcgagctggtgggcaccggcaccgacgagaccccggccgccgagctgtgcgtggtgggc
gacgccgaccagtcgatctacgccttccggggcgccacgatccgtaacatcctccagttc
gaggaggactaccccagcgcgcggacgatcctcctcgagcagaactaccgctccacccag
accattctgagcgcggccaacgcggtcatcgagcgcaatgagaaccgccgcccgaagaac
ctgtggacggatgccggcgccgggaccgagatcaccggctatgtggccgacaccgagcac
gacgaggcccagttcgtcgccgacgagatcgaccggctgaccgacgcggacgacgccagg
gccggggatgtggcggtcttctaccggaccaacgcccagtcccgtgtcttcgaagaggtc
ttcatccgggtcgggctgccgtacaaggtcgtcggcggggtgcgcttctacgagcgcaag
gaggtccgcgacgtcctcgcgtatctgcgggtgctggccaaccccgaggacgccgtcccg
ctgcgccggatcctgaacgtacccaagcgcggtatcggggagcgcgcggaggccatgatc
gacgcgctggccctgcgcgagaagatcaccttcccgcaggcgctgcgccgggtcgacgag
gcgtacggcatggcggcccgctcggccaacgccgtcaagcggttcaacacgctcatggag
gagctgcacaccatcgtggagtccggggcgggcccggcgaccgtcctggaggccgtgctg
gagcgcaccggctatctggccgagctccagacgtccaccgatccacaggacgagacccgg
atcgagaacctccaggagctcgcggccgtggccctggagttcgagcaggaccggggcgag
aaccccggcaccctcgcggacttcctggagcaggtcgcgctcgtcgctgactcggaccag
atcccggacgaggacaccgagggctccggcgtgatcacgctgatgacgctgcacacggcg
aagggcctggagttcccggtcgtcttcctcaccggtatggaggacggcgtcttcccgcat
atgcgggcgctcggccagaccaaggagctggaggaggagcgccggctggcctatgtgggg
atcacccgggcccgcgagcggctctatctgacccgctcgacgatgcgcagcgcatggggc
cagcccgcgtacaacccgccgtcccgcttcctggaggagatcccggaccagtatgtgcgg
tggcggcgcaccgggcccgccaccccgtcggcgtccatgagcggcgtcgcctcgactccg
ccgtcagggctgtcgtccggtctgtcgtcgtcgcgttcgcgcaccgggggcagcgggttc
gccacccggcgggccagtgagcgcccggtggtcgcgctggccatcggcgaccgggtcacc
catgactcgttcgggctcggcacggtggtggcggtgaagggcagcggggacaacgcggag
gcgacgatcgacttcggtgacgagaagcccaagcggctgctgctgcggtacgcaccggtg
gagaagctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (20)   

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