KEGG   Streptococcus mitis: smi_1587
Entry
smi_1587          CDS       T01173                                 
Symbol
recJ
Name
(GenBank) single-stranded DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
smb  Streptococcus mitis
Pathway
smb03410  Base excision repair
smb03430  Mismatch repair
smb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    smi_1587 (recJ)
   03430 Mismatch repair
    smi_1587 (recJ)
   03440 Homologous recombination
    smi_1587 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smb03400]
    smi_1587 (recJ)
DNA repair and recombination proteins [BR:smb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     smi_1587 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     smi_1587 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      smi_1587 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 YjeF_N AlaDh_PNT_C
Other DBs
NCBI-ProteinID: CBJ22827
UniProt: D3HAC9
Position
complement(1630499..1632865)
AA seq 788 aa
MILHQKICLVKSYLKNSLKFYKKAIWIEKKPKSCYNEAIEFLERVDVFLITPTYEWQFAP
QVEDADFTKIAKKAGLGSEVARLLFERGIQDQESLKKFLEPSLEDLHDPYLLHDMDKAVE
RIRQAIEEGENILVYGDYDADGMTSASIVKESLEQLGAECRVYLPNRFTDGYGPNASVYK
YFIEQEGISLIVTVDNGVAGHEAIELAQSMGVDVIVTDHHSMPETLPDAYAIVHPEHPDA
NYPFKYLAGCGVAFKLACALLEEVQVELLDLVAIGTIADMVSLTDENRILVQYGLEMLGH
TQRIGLQEMLDMAGIAANEVTEETVGFQIAPRLNALGRLDDPNPAIDLLTGFDDEEAHEI
ALMIHQKNEERKEIVQSIYEEAKTMVDPEKKVQVLAKEGWNPGVLGIVAGRLLEELGQTV
IVLNIEDGRAKGSARSVEAVDIFEALDPHRDLFIAFGGHAGAAGMTLEVEKLSDLSQVLE
DYVREKGADAAGKNKLNLDEELNLETLSLETVKSFERLAPFGMDNQKPVFYIKDFQVESA
RTMGAGNAHLKLKISKGEASFEVVAFGQGRWATEFAQTKNLELAVKLSVNQWNGQTALQL
MMVDARVEGVQLFNIRGKNAVLPEGVPVLDFAGEVPNIAASEAIVVKTIPEDITQLKTIF
QKQNFSAVYFKNDIDKAYYLTGYGTRDQFAKLYKTIYQFPEFDIRYKLKDLATYLNIQQI
LLVKMIQVFEELGFVTIKDGVMTVNKEAPKREIGESRIYQNLKQTVKDQEMMALGTVQEI
YDFLMEKE
NT seq 2367 nt   +upstreamnt  +downstreamnt
atgattttacaccaaaaaatttgtcttgtcaaatcatatcttaaaaattcactaaaattt
tataaaaaagcaatctggatagagaaaaagcctaaatcatgttataatgaagcaatagaa
ttcttagaaagagtggatgtctttttgataacacctacttatgaatggcagtttgccccg
caggttgaagatgcggattttacaaagatagccaagaaggctggactgggttctgaggtg
gctcggttattatttgagagagggattcaggaccaagaaagtctgaagaaatttttagaa
ccttctttggaggacttgcatgacccttatctgctccatgatatggacaaggcagtggaa
cggattcgtcaggccattgaagagggggaaaatattctcgtttatggagactacgatgcg
gatggcatgacttcggcgtcaattgttaaggaaagtttggaacaacttggtgccgagtgc
cgtgtttacttgcccaatcgttttactgatggctatggtccaaatgctagtgtttataaa
tactttatcgagcaagaaggaatttctttgattgtgacggtggacaatggggttgctggt
catgaggctattgaattggcccagtctatgggagtggatgtcattgtgacagaccaccat
tccatgcctgaaaccctccctgatgcctatgccattgtccatcctgaacatccggatgcg
aactatccttttaaatatttggctggttgcggagtggctttcaagctggcttgtgccctg
ttagaagaagtacaagtggaattgcttgatttggttgctattggtaccattgctgatatg
gttagtttgacagatgagaaccgtatcttggttcaatatggtctggaaatgttaggtcat
acccagcgtattggcctacaagaaatgctggacatggctgggattgccgccaacgaagta
acagaagaaacggttggtttccagattgcccctcgtttgaatgccttgggacgtctagat
gatcctaatcccgctattgatttgttgactggatttgacgacgaggaagctcacgagatt
gcccttatgattcatcagaaaaacgaagagcgcaaggaaatcgtccagtctatctatgaa
gaagctaagaccatggtggaccctgagaagaaggtccaagtcttggccaaggaaggctgg
aatcctggggttctaggaatcgtggctggtcgtttgttggaagaattgggacagacagtc
attgttcttaatatagaagacggtcgtgctaagggcagtgctcgtagtgtggaagcggtc
gatatttttgaggctctagatccccatcgagacctctttatcgcctttggtggccatgct
ggtgcggctggaatgacgctggaagtggagaaactctcagatttatctcaggtcttggaa
gattatgttcgtgaaaaaggtgcagatgctgctggcaagaacaagttaaatctagatgaa
gaactgaatttggagacacttagcttggaaacggtcaaaagttttgaacgtttagctccc
tttggaatggacaatcagaaacctgtcttttatataaaggattttcaggtcgaaagtgcc
cgtactatgggggcaggcaatgctcatctcaagttgaaaatttccaaaggtgaggcgagt
tttgaagtggtagcctttggccaaggcagatgggcgacagagtttgctcaaaccaagaat
ttagagctggcagtcaaattgtctgtcaaccaatggaatggccaaactgccctccagttg
atgatggtggatgcgcgtgtggagggtgttcaactctttaacatccgtgggaagaatgca
gtcttgccagaaggagttccagtcttggattttgctggagaagtgccaaatatagcggct
agtgaagctattgtcgtgaaaaccattcctgaagatattactcagctgaagaccattttt
cagaaacagaatttttccgctgtctatttcaaaaatgatattgataaggcctactatctg
acaggttatgggactagagatcagtttgcaaaattgtacaagactatctaccagtttcca
gagtttgatattcgctataaactgaaggatttggccacttatctcaatattcaacaaatc
ttacttgtcaagatgattcaagtctttgaagaactaggctttgtgaccatcaaagatggt
gttatgacagtcaataaggaagcgccaaagcgagagataggagaaagtcggatttaccaa
aatctcaaacaaaccgttaaagaccaagaaatgatggcgctgggtaccgtgcaagaaatt
tatgactttttaatggaaaaagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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