KEGG   Breviolum minutum: v1.2.005910.t2
Entry
v1.2.005910.t2    CDS       T04349                                 
Symbol
symbB.v1.2.005910.t2
Name
(OIST) -
  KO
K13098  RNA-binding protein FUS
Organism
smin  Breviolum minutum
Pathway
smin03015  mRNA surveillance pathway
smin03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    v1.2.005910.t2 (symbB.v1.2.005910.t2)
  09122 Translation
   03015 mRNA surveillance pathway
    v1.2.005910.t2 (symbB.v1.2.005910.t2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smin03041]
    v1.2.005910.t2 (symbB.v1.2.005910.t2)
Spliceosome [BR:smin03041]
 Complex A
  Other components
   Complex A specific factors
    v1.2.005910.t2 (symbB.v1.2.005910.t2)
SSDB
Motif
Pfam: RRM_1 RRM_7 zf-RanBP DZR_2 HVO_2753_ZBP DZR zf-ribbon_3
AA seq 355 aa
MADMMEWAMQMASLYGAPSGWKGDGATKGGKGYDYGGGGNSGGFAGAAGAGGAGGGYGGY
GKGKGDSGGGKTSPATNSSCKVFVGGLPKVITEASVRQSFAHFGPIVEVKMMVGVMGESK
GYCFITFANIESANAVLANYESNTVEGKQQSGGGPKAGDWTCPNCGDNVFAWRTQCNRCG
YDSVSGVVAPPGTANGGGGKGAGGFSRPGDWICPSCGDLNFASRENCRSCGHHKPSQAQG
VGGNSGVAGSEGPEGHGSRDEKVCQQQFDIFLVKSSNTLGIDVDLMDGRAMLVQAVRETG
LVSEWNRTHPSLAVRQHDRIVKVNGIEGNTDLMAQKCREDSHLQLTVSRIGRASQ
NT seq 1725 nt   +upstreamnt  +downstreamnt
ctggaagttgggttgccgcgggaagcatggactggttgacagggaaaggtaaaggcaaaa
gcgatggtggtatggctgatatgatggaatgggccatgcaaatggccagcttatacggtg
caccttccggatggaaaggcgacggtgccaccaagggtggcaagggctatgattatggtg
gcggcggaaacagcgggggttttgccggggctgccggggctggcggggctggcggaggct
atggcgggtatggcaaaggcaaaggcgacagtggtggaggcaagacctcaccggcgacca
acagttcgtgcaaggtctttgttggtggcctaccaaaggtgatcacagaagcctcggtga
gacagtccttcgctcactttggccctatcgtagaagtgaagatgatggttggagtgatgg
gcgagtcgaaaggttattgcttcatcacctttgccaatatcgaatctgccaatgctgtac
tagccaattatgagagcaacactgtggagggcaagcagcaaagcgggggtggtcccaagg
caggtgattggacatgtcccaattgcggtgacaatgttttcgcttggcgcacgcaatgca
accgctgcggctacgattctgttagtggcgtggttgcaccgccaggaacagcaaacggtg
gaggtggtaagggtgctggcggcttcagtcgccctggagactggatctgtccttcatgcg
gagacttgaactttgcctcccgggagaactgcagaagctgcggccatcacaagccgagcc
aagcgcagggggtcggcggcaacagcggcgtcgctgggtctgaaggccctgaaggccatg
ggtcgagagatgaaaaggtttgccaacagcaatttgatatcttcctcgtgaaatcatcaa
acaccctggggatcgacgttgatctcatggatggccgtgctatgctcgtccaagccgtac
gggagacgggcttggtctctgagtggaacaggacacatcccagccttgcagtcagacagc
acgaccgcattgtgaaggtgaatggcattgagggcaacactgaccttatggcacagaaat
gtcgagaggactcgcatctccaactgactgtcagcagaatagggcgagccagccagtgat
cagacgtaccatgtctctatgcgcgaactttcacctttttacacctgatgtatgagtgat
tatgagtgttgacaggcgctgctgttgctatcaggggaagaagactcggaaaacatcttc
aaaatagaatcatattaactcatttcaggatcttacaaaaagggagtgtcactctctttc
tctgattccatgctgcaagcggccgtcagcagatttctaaagttgttttcttttgaatcc
gggtgttagtgatattcagatttaacatccgagggatactgcaacctcagtagccccatg
agatgcatgtgtacagaattgcattgggcctcctactgtgatttccgtgcgatgaacctt
gggaaagcatggtcatttctcacgacgaatgtttgagtgatcgttcagaggtcccattgc
tggggagctgtgtgttgtttgaatatgcgatccatgcggttgctcacacatggccaccac
ccatgggcgaaagattccttcgactatggcaaagtgtgacgtcgaagcccaactagacac
aaatggcttgccacagccaggaggcaatgaagaagacatatgatc

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (1319)   
   KEGG ORTHOLOGY (1)   
   RefGene (1317)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (1331)   

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