KEGG T04349: v1.2.007922.t3

Breviolum minutum: v1.2.007922.t3

Entry

v1.2.007922.t3    CDS       T04349

Symbol

symbB.v1.2.007922.t3

Name

(OIST) -

K07562

60S ribosomal export protein NMD3

Organism

smin Breviolum minutum

Pathway

smin03008

Ribosome biogenesis in eukaryotes

smin03013

Nucleocytoplasmic transport

Brite

KEGG Orthology (KO) [BR:smin00001]
09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    v1.2.007922.t3 (symbB.v1.2.007922.t3)
   03008 Ribosome biogenesis in eukaryotes
    v1.2.007922.t3 (symbB.v1.2.007922.t3)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smin03009]
    v1.2.007922.t3 (symbB.v1.2.007922.t3)
Ribosome biogenesis [BR:smin03009]
Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    v1.2.007922.t3 (symbB.v1.2.007922.t3)

SSDB

Motif

Pfam:

NMD3_OB NMD3 NMD_SH3 DUF627

AA seq 710 aa
MSYWQRSEHRKTLMFLEQLILQHKAHKNMIQLQNVKDGLDFFFHRDRDAQDFLAFLKNWV
VAKHQESKHLVSHNAQNTTYRFKRTTCEVEMPVDPMVSAISAMKFGEELPSAGRSERLSF
TVEPQLLRAAPLQVVLSGWCKHWKGLHVESGEELFELSRPAQSIDVFLSHDWETSRWMKL
MAMLLVFNSPAAAMAALLASIATGVAQVSGIVGDRLWFFPSYWVYLFVLCFWQRIRGVCR
HRMVFMDKLCINQKDDKMKEVGILGLGAFVQRSDKLLVLWWCAYEMGCFFSREEGQLEIL
PVKVAYILFLTAIFWHAIMAALRFAAIWLLQGGLDENSPALLLSLSAFCGPVTLVVLPLM
NYLGMSIMRDVHQLPDQLQNFRLQDAQCFCCSHHHLHPETGQELICDRELVYETLSELYS
ASQKESGVDPLEKFNRRVRDRLGPKILRRVGVRFPFKYVLFIVMVEVCPVCPDDLVYLPK
KMAQALGGLPPLMLCTKAAAHLVLLDPASMRSVEVAATEYWKKPFHSVAIPSKMTEFIVL
DVDEEVSGHARGSRGVPCEVEVARASDFGKNDDRLLLRSHLGGILRVGDSVMGYDLRTLH
LGVEDEELSGVPLEVYLVKKKRPERAMRQKRPGKGSKMAQQLRQAKEQKEAQAEAVAPEE
EEGKDEAEEEVVAMKEAADALLSQFGAPSGGADCRPNGEEVLEVSEAAEA

NT seq 2312 nt +upstreamnt +downstreamnt
tcaacgacaaaaaggaaagctgccgcgtggggacgctgtcatgagctattggcaacgatc
agagcaccggaagaccttgatgtttttggagcagctgattttacaacacaaggcgcataa
gaacatgatccaactgcaaaatgtcaaggatggcttagacttcttcttccatcgggatcg
tgacgcccaggatttcttggccttcctcaagaactgggtggtggccaaacaccaggaatc
caagcatttggtgagtcacaatgctcaaaacaccacgtaccgcttcaaacgaaccacgtg
cgaagtcgagatgcccgtggatcccatggtttcagccatttcagccatgaaattcggtga
ggagctcccttcggctggacgctcagaaaggttgagtttcactgtggagccacaactgtt
gagggctgcacctttacaggtggttttgagtggttggtgcaagcactggaaaggtttaca
tgttgagtctggtgaggagttgttcgagctcagccgtccagcgcagtctatcgatgtttt
cttaagccacgattgggagacatcacgatggatgaaactcatggcgatgctactggtttt
caattctcctgctgctgccatggcggccttactggcaagcattgctactggtgtggcaca
agtttctggtattgtgggcgaccgcttgtggttctttccgtcctactgggtctatctctt
tgtcttgtgcttctggcagagaatcagaggtgtttgcagacataggatggtcttcatgga
caagttgtgcataaatcagaaggatgacaaaatgaaggaggttggcattcttgggcttgg
ggcctttgtacaacgatctgacaaattgcttgttttatggtggtgtgcttatgagatggg
atgtttcttcagccgtgaagagggccaactggaaatccttccggtgaaggtggcttacat
tctgtttctaacggccatcttctggcatgctatcatggctgccttgcgcttcgcagccat
atggcttttgcaaggtggtcttgatgagaattcccctgcccttttactctcattgtcggc
tttttgcggtcctgtgacgttggtggttttacccttgatgaattacttggggatgagcat
catgcgcgacgtgcaccaattgcccgatcagttgcaaaatttccgactgcaagatgctca
gtgcttctgttgcagccaccatcatcttcatccagagacaggtcaagaactcatttgtga
tcgcgaacttgtgtatgagaccctgtctgagttgtattccgcgagccagaaagagagtgg
tgtcgaccccctggagaagtttaatcgtcgcgttcgggaccggcttggtccaaagattct
gcgacgcgtgggtgttcgctttcccttcaaatatgttctcttcatcgtcatggtcgaagt
gtgtccggtgtgtcctgatgatctggtctaccttcccaagaagatggcacaggccttagg
tggtttgccgccattgatgttatgcaccaaagctgctgctcatttggtgttgctggatcc
tgcttctatgcgttccgtggaggtcgctgctacggagtattggaagaaacccttccactc
agtagccataccatccaagatgacggaattcatcgtcttggacgtggatgaggaggtttc
cggccacgctcgcggttcgcgaggtgttccttgcgaggtggaagttgccagagcatcaga
cttcgggaaaaacgatgatcgactactccttcgatcgcatctgggtggcatcttgcgcgt
gggcgattcggtgatgggctacgacttgcggacgttacacttaggtgttgaggatgagga
gctgagcggagtgcctttagaggtgtacttagtgaagaagaagcggccagaacgagctat
gcgacaaaaacggcccggcaaaggatccaaaatggcgcagcaattgcgacaggcgaagga
gcaaaaggaggcacaagccgaagcagttgcgccagaggaggaggaaggtaaagatgaagc
agaagaggaggtggtagcgatgaaggaagcggctgatgccttgctgtcacagtttggtgc
tcccagcggcggagcagactgcaggcccaacggagaagaagttttagaggtctccgaggc
ggcggaggcgtgacatgtttgcatgtatatatggtcacccccccaagatctacctaagtc
attatttcaatggtattatatatatgtgtgcatataagtaaacacacatatatatatata
tatacatacactaataagagtaattgataata

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (131)   
   KEGG ORTHOLOGY (1)   
   RefGene (129)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (140)   

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