KEGG   Breviolum minutum: v1.2.015587.t1
Entry
v1.2.015587.t1    CDS       T04349                                 
Symbol
symbB.v1.2.015587.t1
Name
(OIST) -
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
smin  Breviolum minutum
Pathway
smin04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:smin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smin03019]
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
   03009 Ribosome biogenesis [BR:smin03009]
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
   04131 Membrane trafficking [BR:smin04131]
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smin04147]
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
Messenger RNA biogenesis [BR:smin03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     v1.2.015587.t1 (symbB.v1.2.015587.t1)
Ribosome biogenesis [BR:smin03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
Membrane trafficking [BR:smin04131]
 SNARE
  SNARE associated proteins
   Others
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    v1.2.015587.t1 (symbB.v1.2.015587.t1)
Exosome [BR:smin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   v1.2.015587.t1 (symbB.v1.2.015587.t1)
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 AAA_5 AAA_33 TIP49 AAA_2 AAA_14 CDC48_2 AAA_22 nSTAND3 RNA_helicase AAA_17 AAA_18 Mg_chelatase AAA_28 Parvo_NS1 ATPase_2 IstB_IS21 Bac_DnaA AAA_7 ResIII NACHT AAA_25 ABC_tran Zeta_toxin AAA_24 NB-ARC Viral_helicase1 TsaE Sigma54_activat Sigma54_activ_2 SLFN-g3_helicase DUF815 AAA_19 Vps4_C KAP_NTPase
AA seq 792 aa
MADGEAAPMVEAPKPTKKRSPNRLVVEEAMNDDNSVISLSQAKMEELNLFRGDNVLIKGK
KRKDTVCIVLADEALDDSKIRMNKVVRKNLRVRLGDIVSVHACGDVPYGKRIHVLPLDDT
IEGITGNLFDTYLKPYFLEAYRPARQGDLFLVRGGFRPVEFKVVGVDPGEFVIVAPDTVI
HCEGEPVKREDEERLDDVGYDDIGGCKKAMGQIREMIELPLRHPTLFKTLGVKPPRGVLL
YGPPGSGKTLIARAIANETGAFFFLINGPEIMSKMAGEAESNLRKAFEEAEKNSPAIIFI
DEIDSIAPKRDKTSGEVEKRVVSQMLTLMDGIKGRGQVVVIAATNRPNSIDAALRRFGRF
DRELDIGVPDDNGRLEILRIHTKNMKLATDVKLEEVASNTHGFVGADLAQLCTEAALTCI
REKMDLIDLEEETIDAEILDSMAVSQEHFKSAMGTVNPSSLRETVVEVPNIKWDDIGGLE
ETKRSLQETILYPIDHPEKFEKFGMQPSRGVLFYGPPGCGKTLLAKAVASECSANFVSIK
GPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTARGSSQGDAGGAGDRVMNQ
LLTEIDGVGAKKNVFFIGATNRPELLDEALLRPGRLDQLIYIPLPDLPARQGILESTLKK
SPVAPNVPLPFVAQKTEGFSGADLAELCQRAAKAAVRDAIAADELNAGDDAMDTTMGSEI
GRKHFEEAFGGARRSVAGSDLAKYDQFRKKFDPIYMNSTAGGGSSGVVINWPDDVGIGAG
AAAADDDDDLYG
NT seq 2678 nt   +upstreamnt  +downstreamnt
acttacacactttttgttggcgcatcgttgaaaaaaccgccatcggatcatggcggatgg
tgaagcagctcctatggtggaagcaccaaagccaacgaaaaagcgatctccaaatcgcct
cgtggtggaagaagccatgaatgatgacaattcagtgatttcgctgtcgcaagcgaagat
ggaagagttgaacctctttcgcggcgacaacgtcttgatcaagggcaagaagcgcaaaga
cacagtatgcatcgtcctagccgatgaagctttggatgatagcaagatccgcatgaacaa
ggtggtgcgcaagaatcttcgagttcggcttggtgacattgtgtcagtgcatgcctgtgg
cgatgtaccttatggaaagcgcattcatgtgcttcccttggatgacaccattgagggcat
caccggcaaccttttcgacacctacttgaagccgtacttcctggaagcctaccgtccagc
ccgtcaaggtgaccttttcttggttcgtggtggttttaggcctgtggagttcaaggttgt
gggtgttgatccaggtgaattcgtcattgtagcaccagatactgtgatccactgcgaggg
cgagcctgtgaagcgagaggatgaggaacgcttggatgatgtgggctatgatgacattgg
tggctgcaagaaagccatgggacaaattcgagagatgattgagctgcctttgcgtcaccc
aacccttttcaagacactgggggtaaagcctccacgaggtgtccttttgtatggccctcc
aggtagtggaaagacactgattgcccgtgccattgccaatgagaccggtgcctttttctt
cctgatcaacggtccagagattatgagcaagatggcaggtgaggcagagtcaaatttgag
aaaggcattcgaagaggctgagaagaactcaccagctatcattttcattgatgaaattga
ttccattgcccccaagagagacaagacaagtggtgaagttgagaagagggtggtctcaca
gatgttgaccctcatggatggtatcaaaggccgtggccaagtggtagtcattgcagccac
caataggcccaactccattgatgcagccttgcgtcgatttggccgatttgatcgcgagtt
ggacatcggagtgcctgacgacaatggcaggcttgaaatcttgagaatccacaccaagaa
catgaagttggccacagatgtgaagctcgaagaagttgcctccaacactcatggctttgt
tggagcagatttggcccagctttgcacagaagcagctttgacttgcatccgggaaaagat
ggacctcattgacctggaggaggagaccattgatgcggagattttggactcgatggctgt
gagccaagagcacttcaaatctgcaatgggcactgtgaacccatcatctcttcgtgagac
ggtggtggaagtgccaaacatcaagtgggatgacatcggtggcttggaggagaccaagcg
ttccttgcaggagaccattttgtatcccattgaccatccagagaaattcgagaagttcgg
catgcaaccttcccgaggagtgttgttctatggcccacctggttgtggcaagactctgtt
ggccaaagctgtggctagtgaatgttcggcaaactttgtgagcatcaaagggcctgaatt
gctgaccatgtggttcggagaatccgaagccaatgtgcgtgaagtctttgacaaagcccg
tgcggcagccccatgcgtcctgtttttcgatgagctggactctatcggcactgctcgtgg
ctctagtcagggagatgcaggtggtgccggtgatcgtgtcatgaatcagctcttgacaga
gatcgacggtgtgggagcaaagaagaatgtcttcttcattggtgccaccaataggccaga
actactggacgaagccttgcttcgtccaggtcgtttggatcagttgatctacatcccttt
gccagacctgccggcaagacaaggcatcctggaatcaacattgaagaagtccccagtggc
ccccaatgtgccactgcctttcgttgcacagaagactgagggcttcagtggagctgactt
ggcagagctttgccaacgcgctgccaaggctgctgtcagggatgctattgccgcagatga
gttgaatgctggtgatgatgccatggacaccaccatggggtcagagattggccgcaagca
cttcgaagaggcctttggcggggccaggcgatcagtggctggatctgaccttgccaagta
tgaccagttcaggaagaaatttgaccccatctacatgaactccactgctggtggtggcag
ctctggtgttgtgatcaactggccagatgatgttggcattggagccggtgcagctgcagc
tgatgatgacgatgacctttatgggtgagagatgatgagtggctcttggattggtgttgg
gagttcactcggatgcttccattttgtttctctagtatcaattttgacctcgcagcgccc
atgcgcgcaggtcatgtggtcatgtggtcacatatgcctcatcagtccgatatatcttgt
ctgctaatagcgggtatgaagaacagccgcgcaagagcagcacatgagggcagggtcaat
agcactggaaagcgatagaagaaaaagagaactcccag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4902)   
   KEGG ORTHOLOGY (1)   
   RefGene (4900)   
   OC (1)   
Protein domain (39)   
   Pfam (39)   
All databases (4948)   

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