KEGG   Stenotrophomonas maltophilia K279a: Smlt3689
Entry
Smlt3689          CDS       T00718                                 
Symbol
recQ
Name
(GenBank) putative ATP-dependent DNA helicase
  KO
K03654  ATP-dependent DNA helicase RecQ [EC:5.6.2.4]
Organism
sml  Stenotrophomonas maltophilia K279a
Pathway
sml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Smlt3689 (recQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sml03019]
    Smlt3689 (recQ)
   03400 DNA repair and recombination proteins [BR:sml03400]
    Smlt3689 (recQ)
Enzymes [BR:sml01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Smlt3689 (recQ)
Messenger RNA biogenesis [BR:sml03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     Smlt3689 (recQ)
DNA repair and recombination proteins [BR:sml03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Smlt3689 (recQ)
SSDB
Motif
Pfam: RQC DEAD HRDC RecQ_Zn_bind Helicase_C ResIII PSD2
Other DBs
NCBI-ProteinID: CAQ47104
UniProt: B2FR51
Position
3762307..3764112
AA seq 601 aa
MASRPAHDLLQRVFGYDDFRGPQQDIVEHVAAGHDALVLMPTGGGKSLCYQVPALLRDGC
GIVISPLIALMQDQVEALRQLGVRAEYLNSTLDAETAGRVERELLAGELDMLYVAPERLL
TGRFLSLLSRSQIALFAIDEAHCVSQWGHDFRPEYRQLTVLHERWPQIPRIALTATADPP
TQREIAERLDLQEARHFVSSFDRPNIRYTVVQKDNARKQLTDFLRGHRGEAGIVYCMSRR
KVEETAEFLCGQGFNALPYHAGLPPEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRF
VAHTDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEAGEERKQLERG
KLDHLLGYCESMQCRRQVLLAGFGETYPQPCGNCDNCLTPPASWDATIPAQKALSCVYRT
GQRFGVGHLIDVLRGSENEKVKQQGHDKLSTYAIGRDLDARSWRSVFRQLVAASLLEVDS
EGHGGLRLTDASRDVLTGRRQISMRRDPASSTSGRERSAQRTGLSVLPQDLALFNALRGL
RAELAREQNVPAFVIFHDSTLRNIAEQRPTSLDELARVGGIGGTKLSRYGPRLVEIVREE
G
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggcttcccgtcccgcgcacgacctgctccaacgcgtctttggttacgacgatttccgt
ggtccgcagcaggacatcgtggagcatgtggctgccggtcatgatgccctggtactgatg
cccaccggcggtggcaagtcgctgtgctaccaggtcccggccctgctgcgtgacggatgt
ggcatcgtcatctcgccgctgatcgcgctgatgcaggaccaggtcgaagccctgcgccag
ctcggcgtgcgtgccgagtacctgaattcaaccctggatgccgagaccgccggccgcgtc
gagcgcgaactgctcgcgggtgagctggacatgctctatgtcgctcccgagcggctgctg
accggccgcttcctgtcgctgttgtcgcgcagccagatcgccctgttcgccatcgacgaa
gcccactgcgtgtcgcagtggggccacgacttccgcccggaataccgccagctgaccgta
ctgcacgagcgctggccgcagattccgcggatcgcgctcaccgccaccgccgacccgccg
acccagcgcgagatcgccgagcgcctggatctgcaggaagcacgccacttcgtcagctcc
ttcgaccgccccaacatccgctacaccgtggtgcagaaggacaacgcgcgcaagcagctg
accgatttcctgcgcggccaccgtggcgaggccggcatcgtctactgcatgtcgcggcgc
aaggtcgaggagaccgctgaattcctctgcggccagggcttcaacgccctgccctaccac
gccggcctgccgccggaagtgcgcgcgaacaaccagcgccgcttcctgcgcgaggacggc
atcgtcatgtgcgccaccatcgccttcggcatgggcatcgacaagccggacgtgcgcttt
gtcgcgcataccgacctgcccaagtcgatggaaggctactaccaggaaaccggccgcgct
ggtcgtgatggcgaagctgccgaggcctggctgtgctacggcctgggcgacgtagtactg
ctcaagcagatgatcgaacaatccgaggccggcgaagaacgcaagcagctggagcggggc
aagctcgatcacctgctgggctactgcgaatccatgcagtgccgccgccaggtgctgctg
gccggtttcggcgagacctatccccagccgtgcggcaactgcgacaactgcctgacgcca
ccggcctcgtgggacgcgaccattccggcgcagaaggcactgagctgtgtctaccgcact
ggccagcgcttcggcgtcggccacctgatcgacgtcctgcgtggcagcgagaacgagaag
gtgaagcagcagggccacgacaagctcagcacctacgccatcggccgcgatctggatgcg
cgcagctggcgcagtgtgttccgccagctggtcgccgccagcctgctggaagtggacagc
gagggccacggtggcctgcgcctgaccgatgccagccgtgacgtgctgaccggccgccgc
cagatcagcatgcgccgcgacccggccagcagcaccagcggacgcgagcgcagtgcgcag
cgcaccgggttgtcggtactgccgcaggacctggcactgttcaacgccctgcgcggcctg
cgtgccgaactggcgcgcgaacagaacgtgcctgccttcgtgatcttccacgacagcacc
ctgcgcaacatcgccgagcagcgcccgaccagcctggatgaactggcccgggtcggcggc
atcggcggcaccaagctgagccgctacggcccgcgcctggtcgagatcgtgcgcgaagaa
ggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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