KEGG   Selaginella moellendorffii: SELMODRAFT_109199
Entry
SELMODRAFT_109199 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14807  ATP-dependent RNA helicase DDX51/DBP6 [EC:5.6.2.7]
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smo03009]
    SELMODRAFT_109199
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SELMODRAFT_109199
Ribosome biogenesis [BR:smo03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    SELMODRAFT_109199
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 Flavi_DEAD CMS1
Other DBs
NCBI-GeneID: 9658990
NCBI-ProteinID: XP_002978831
JGI: 109199
UniProt: D8S637
Position
Unknown
AA seq 513 aa
MAKAPPVLQWMRQPLDVNSFEEQSLDSVPFLHPGLMESLRNVGIHSLFPVQAAVWHETVG
PGGGARDLSISSPTGSGKTLAYSLPIAQSLSQCLLRRLRALIVVPTRDLAMQVKQVFDAI
APSVGLSVGIAVGQTSVAAEASQLVLFPGKIDTCFRELHLASDNLAESRVDILVATPGRL
MDHIQNTPGFTLEHLQYLVVDETDRLLREAYQEWLPTVLEAASAKNFSPSDDSNPGIGSV
RTIRRSCLERGIKGCVVPRLQKIIVSATLTRDPAKIAQLRLYHPLSVALSTSDNLYKLPE
QLRSYTIICKAQQKPLKLVTLLHSLGDQRTVIFTSSVSNTHRLSTFLACFEDLPFRAVEY
SSFQHQLARSKALAAFRAGEAQVLVASDAMARGMDVEGVTHIINYDMPPFARTYVHRVGR
TARAGRSGSCFTLLRKEEVRYFKSILAKVQNSSCKTYKVSSESTKELRPRYWTALQKLKE
ILDAGAGKKGHEMYAEEVTAADDAAVVASLLPG
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcaaaggcgcctccggtcttgcaatggatgcgccagccgctggatgtcaactctttc
gaggagcaaagcctcgattctgtgccatttcttcatcctggcttgatggaatcgttgcga
aacgttggaattcactcgctattccccgtgcaagcggcggtgtggcacgaaaccgtgggt
cctggaggtggcgccagggatttaagcatctcgtctcccactgggagtggcaaaactctc
gcgtactccttgcccatcgctcaaagcctctcccagtgtcttctaaggcgccttcgagct
ctcattgtggtgccaactcgtgatctagcaatgcaggtgaaacaagtctttgatgctata
gctccttcggttggtctttccgtcggtattgctgttggacaaacttctgtagccgctgaa
gcctctcagctcgtgcttttccctggaaagatcgatacttgcttccgggagctccatctt
gccagtgataatcttgcggagagtcgagtcgacattctggttgccacgccgggtcggctc
atggatcacatacaaaacactcctgggtttacactggagcatcttcaatacttggttgta
gatgagacagatcgacttctgcgtgaggcgtatcaggaatggcttccgaccgtccttgaa
gcagccagtgccaagaacttttctcccagcgacgatagtaatcccggcattggctcggtt
cgcaccatccgccgctcgtgcttagaaagaggtatcaaaggctgcgtcgtaccgaggctt
cagaagattattgtatcggctactttgacaagagatccagcgaagatcgcacagcttcgg
ctgtaccatccactttccgttgcactgtcgacatcggacaacttgtataagctcccggag
caattgcggtcctacacgattatctgtaaggcgcaacaaaagccattgaaactcgtcaca
cttttgcacagcctgggtgatcagcgaacagtgatcttcacctcgtccgtgtcaaacacc
catcgcttatcaacattcctggcgtgcttcgaggatcttccttttagagctgtcgagtac
tcgagcttccaacatcagctggcacgaagcaaagccttggccgcgtttagagccggggag
gcacaagttttggtggcgtctgacgcaatggcccggggaatggacgtcgaaggtgtcacg
cacataatcaactacgacatgcctccttttgcgagaacatatgtacaccgagtcggccgg
actgctagagctggaagatcaggctcttgcttcacgcttcttcgcaaggaagaggtgagg
tatttcaagagcattctcgccaaggtccaaaacagctcctgcaagacgtacaaagtgtcc
tccgaatccactaaagagctccgtccccgctattggactgctttacaaaagctaaaggag
attctggatgccggggctggaaagaaggggcatgaaatgtatgccgaagaagtaacagcg
gctgatgatgcagcggtggtggcttcactgttacccggctag

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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