KEGG   Selaginella moellendorffii: SELMODRAFT_270852
Entry
SELMODRAFT_270852 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03231  elongation factor 1-alpha
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_270852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_270852
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_270852
   03012 Translation factors [BR:smo03012]
    SELMODRAFT_270852
   04131 Membrane trafficking [BR:smo04131]
    SELMODRAFT_270852
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:smo04147]
    SELMODRAFT_270852
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     SELMODRAFT_270852
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    SELMODRAFT_270852
Translation factors [BR:smo03012]
 Eukaryotic type
  Elongation factors
   SELMODRAFT_270852
Membrane trafficking [BR:smo04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    SELMODRAFT_270852
Exosome [BR:smo04147]
 Exosomal proteins
  Proteins found in most exosomes
   SELMODRAFT_270852
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 FlpD GTP_EFTU_D4 SRPRB AAA_22
Other DBs
NCBI-GeneID: 9632489
NCBI-ProteinID: XP_002970579
JGI: 270852
UniProt: D8RH50
Position
Unknown
AA seq 447 aa
MGKEKAHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRTIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETNRYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYEEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLEWYKGPTLLEALDQVTEPKRPSDKPLRLPLQD
VYKIGGIGTVPVGRVETGVLKPGMVVTFGPTGLTTEVKSVEMHHESLVEALPGDNVGFNV
KNVAVKDLKRGFVASDSKNDPAKEAASFTSQVIIMNHPGQIGNGYTPVLDCHTSHIAVKF
AEILTKVDRRSGKELEKEPKFLKNGDAGFVKMLPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVIKAVEKKEPTGAKVTKAAAKKK
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgggtaaggagaaggctcacatcaacatcgtggtcattggacatgtcgactccggcaag
tccactaccacggggcatctcatctacaagctgggaggaatcgacaagcgaacgatcgag
aggttcgagaaggaggcggccgagatgaacaagcggtcgttcaagtacgcgtgggtgctg
gacaagctcaaggccgagcgcgagcgtggaatcacaatcgatattgcgttgtggaagttc
gagaccaacaggtactactgcaccgtcatcgacgctcccggtcaccgcgatttcatcaag
aacatgatcacgggaacttcccaggctgactgcgctgttctcattatcgattccaccact
ggaggtttcgaggctggtatctccaaagatggtcagacccgtgagcacgctcttctcgct
tttactcttggagtgaagcagatgatctgctgctgtaacaagatggacgctaccaccccg
aagtactccaaggcgaggtacgaagaaatcgtcaaggaggtgtcgtcctacctcaagaag
gtcggctacaaccctgacaagatccccttcgttcccatttccggtttcgagggtgacaac
atgatcgagaggtcgaccaacctcgaatggtacaagggcccgactcttctcgaggctttg
gaccaggtgaccgaacccaagaggccatcggacaagcccctccgcctcccactccaggac
gtttacaagatcggaggaattggaaccgttcccgtgggacgagtggagaccggagtcctc
aagcccggtatggtggtgactttcggcccaaccggtctgacgactgaggtgaagtccgtg
gagatgcaccacgagtcccttgtggaggcactccccggtgacaacgtcgggttcaacgtg
aagaacgtcgcggtgaaggatctcaagcgtggtttcgtggcttctgactcgaagaacgac
ccggccaaggaggctgccagcttcacttcccaggtgatcatcatgaaccacccgggacag
attggaaacggctacaccccggtgctcgactgccacacctctcacatcgccgtcaagttc
gccgagatcctgaccaaggtggacaggcgatccggaaaggagctggagaaggagcccaag
ttcctgaagaacggtgacgctgggttcgtgaagatgctgccgaccaagcccatggttgtg
gagacgttcgcggagtatcctccattgggacgctttgcggtgcgtgacatgaggcagacg
gtggcggttggagtgatcaaggccgtggagaagaaggaacccaccggtgccaaggttacc
aaggcggcggccaagaagaaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

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