KEGG   Selaginella moellendorffii: SELMODRAFT_32458
Entry
SELMODRAFT_32458  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K07964  heparanase [EC:3.2.1.166]
Organism
smo  Selaginella moellendorffii
Pathway
smo00531  Glycosaminoglycan degradation
smo01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:smo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00531 Glycosaminoglycan degradation
    SELMODRAFT_32458
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:smo00536]
    SELMODRAFT_32458
Enzymes [BR:smo01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.166  heparanase
     SELMODRAFT_32458
Glycosaminoglycan binding proteins [BR:smo00536]
 Heparan sulfate / Heparin
  Enzymes
   SELMODRAFT_32458
SSDB
Motif
Pfam: Glyco_hydro_79n
Other DBs
NCBI-GeneID: 9638352
NCBI-ProteinID: XP_002976894
JGI: 32458
UniProt: D8S0W4
Position
Unknown
AA seq 488 aa
TLALDASIPVATVDEHFVCATIDWWPQGKCNYGSCSWFHSSILNLDLTNRLLAEAVTALA
PLLIRLGGSLEDQIFYDVGSSATTTTCKTFTTQNHRFGFSTGCLNMSRWQQLNEFFQRTG
SLVAFGLNALHGKERIDNTFQGPWNSSNARDFIAYTASKRYPIKAWGLGNELSSSFSGVT
LDSRNYAADVDELQQIIDEIYGTGQKPVLVAPDGFFYAYWYSQVLQQTRTDPALRAVSFH
VYDLGPGDGKNIAARILSAAHTDRYQQVQRVLRQYGNGAKAWVGEAGGIYNGGQHLVSDA
FVFSFWYLDQLGMAALHNTAVFCRQSLIGGNYGLLDSNFNPNPDFYSALLWKRLMGEVVL
NVTSQSLNSSSFHTYAHCLKNARVSSLVWLTPFAYSNVEQGGIAVLVINFSNNTQVVLDL
GLKSQKLEYHLSSPDGNVQSQRVALNGQVLEGAKSELKAIAVEGSNPSKVAPLSIAFITL
PDAFVPAC
NT seq 1464 nt   +upstreamnt  +downstreamnt
accttggcccttgatgcatcaattcctgtggctactgtagatgaacattttgtctgcgca
acaattgactggtggccgcaggggaagtgcaattatggaagttgcagctggttccattct
tctatactcaacctggatcttacaaatcgtctgcttgctgaggctgtgacagcgttggct
ccactattgatacggcttggagggtctttggaggatcagatcttttacgacgttggaagc
tctgccacgacgacgacttgcaagactttcaccactcagaaccacaggttcggattttct
actggatgtctcaatatgtcacgatggcagcaactaaatgaattctttcagagaacagga
tcgctggtggcatttggtctaaacgctttacacgggaaagaacgtatcgataacacattc
cagggaccttggaactctagcaatgcgcgagatttcatagcatacactgccagcaaacgc
tatcctatcaaagcttgggggcttggcaatgagctaagtagtagttttagcggagttaca
ttggattcgaggaactatgcagcagatgtggacgaactccagcagataattgacgaaatc
tatggaaccgggcaaaagccagttctcgtagcaccggatggctttttttatgcttactgg
tacagccaagttttacagcaaaccagaacagatccagcattgagagctgtcagttttcac
gtctacgatcttggaccaggtgatggcaaaaacattgctgctcggatactcagcgcggct
cacaccgatagatatcagcaagtccagcgcgttctccgccagtatggaaatggagcgaag
gcttgggtgggagaagcaggagggatttataacggtggtcagcacctcgtcagtgacgca
tttgtctttagtttttggtacttggaccagcttgggatggctgcgcttcacaacacggca
gtattctgtcgccaaagtcttataggaggtaactacggcctcctcgattcaaacttcaat
ccaaatccagacttttactcggcgcttctctggaagaggcttatgggcgaagtcgtgtta
aatgtgacatcacaaagtctcaactcgtccagcttccacacatacgcacactgtttgaaa
aacgcccgggtgagctccttggtttggctcactcctttcgcttattcgaatgtggaacag
ggaggaatcgctgtcctggtgatcaacttcagcaacaacacacaggtggtgctcgatctg
gggctcaagtcgcaaaagctggagtaccacttgagctcgccggatggaaacgtccagagc
caaagagtggctctcaatgggcaagttttggagggcgctaagagcgaactgaaggccatt
gcggtggagggatccaacccgagcaaagtagcaccgctctcgattgctttcatcacgctc
ccagatgccttcgtccccgcctgt

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (1)   
   Pfam (1)   
All databases (43)   

Download RDF
DBGET integrated database retrieval system