KEGG   Selaginella moellendorffii: SELMODRAFT_37142
Entry
SELMODRAFT_37142  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
smo  Selaginella moellendorffii
Pathway
smo03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    SELMODRAFT_37142
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smo03000]
    SELMODRAFT_37142
   03021 Transcription machinery [BR:smo03021]
    SELMODRAFT_37142
Transcription factors [BR:smo03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    SELMODRAFT_37142
Transcription machinery [BR:smo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     SELMODRAFT_37142
  RNA polymerase III system
    TFIIIB
     SELMODRAFT_37142
  RNA polymerase I system
    SL1/TIF-1B
     SELMODRAFT_37142
SSDB
Motif
Pfam: TBP DUF3378 DUF4295
Other DBs
NCBI-GeneID: 9647391
NCBI-ProteinID: XP_002981418
JGI: 37142
UniProt: D8RF83
Position
Unknown
AA seq 196 aa
GFQGGVAVDLSKHPSGIVPTLQNIVATVNMDCKLELKTIALHARNAEYNPKRFAAVIMRI
REPKTTALIFASGKMVCTGAKSEQNCRLAARKYARIIQKLGFPSQFKDFKIQNIVGSCDV
RFPIRLEGLAFSHGHFSTYEPEIFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDEIYEA
FENIYPVLAEFRKIPQ
NT seq 591 nt   +upstreamnt  +downstreamnt
ggattccaaggcggcgtggctgttgacttgagcaagcatccgtcagggatcgttcccacg
ctccagaacatagtcgcgactgtgaacatggattgcaagctcgagctaaagacgatcgcg
ctgcatgcaaggaatgccgagtacaatcccaagcgttttgctgctgtgatcatgcgtata
agagaacccaaaaccacggctctcatctttgcgtccggaaagatggtgtgcactggggcc
aagagcgaacaaaattgcaggcttgcggctagaaagtacgctcggatcatccaaaagctt
ggctttcccagtcaattcaaggactttaagattcagaacatcgtgggatcgtgcgatgtc
cgatttccaatccggctcgaaggcctcgccttctcccacggccacttctcaacatacgag
ccggagatcttcccaggactcatttacagaatgaagcagcctaagatcgtcttgctcatc
ttcgtctctggcaaaatcgtgctcacgggagcaaaggtaagagacgagatctacgaagct
ttcgagaacatctaccccgtgctagcggaattccgaaagatcccacagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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