KEGG   Selaginella moellendorffii: SELMODRAFT_408754
Entry
SELMODRAFT_408754 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K15362  fanconi anemia group J protein [EC:5.6.2.3]
Organism
smo  Selaginella moellendorffii
Pathway
smo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    SELMODRAFT_408754
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_408754
Enzymes [BR:smo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     SELMODRAFT_408754
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-B complex
     SELMODRAFT_408754
   FA (Fanconi anemia) pathway
    Downstream FA components
     SELMODRAFT_408754
SSDB
Motif
Pfam: DEAD_2 Helicase_C_2 DEAD T2SSE CBP_BcsF
Other DBs
NCBI-GeneID: 9632835
NCBI-ProteinID: XP_002967609
JGI: 408754
UniProt: D8R9V1
Position
Unknown
AA seq 1004 aa
MEAQQYVYQICGVKVEFPYRAYGSQLAFMGKVITTLERAFRDPDGHCNALLESPTGSGKS
LSLLCAALAWQQHRMVAAASIGPATQFGGGFIPEGPASGAEDKHQAKKNKPPTIFFATRT
HSQISQIVHELKKTNYRVPMAILAARKHYCTNQHVCKKANLDDECKVLLKDPHKACPQFK
NVNKLKHHPALRKGGCHETHDIEDLVTLARSVRGCAYFTSRIMAADAQIVFCPYSYILSP
IFRKAMDVDIRGAIIIFDEAHNIEDMSREAGSVDLDTSILEASSEELRNELEELSSSEDS
HDLYRPLFDMVQELLIWIRQQDENLQRKEVDHYYSNWTGPKGLEQLQAAGISSESFSIQL
DCAVKAAGAASDPDPEKPHLSGRCASAMEGLFCALKFMLSKPEYIHDYQIVVQRVLNKVE
GTDEWLHKLSFWCLNPGVVFNEIATICKSVVLTSGTLSPMGSFASELGTSFEMVMEAPHI
IDLNSQLLVSAVSFGPGNVPLNASYQYANTVAFQDALGTALEQICNIVPDGALVFFPSYK
LLQRVCNRWKTTGQWKRILDIKSVFVEPQGSTGKFEDILKDFYKVIKGENVEPSRRKRIL
TPKNFTSAGGQTGAAFLAVCRGKVVVGIPFPNLNDVQVAMKKNYNDNQKTLKSLLGGDQW
NVTGRCIRHRGDYGAIVLLDERFNKANYTGYMSKWLRKSIMRPASFQEALRDLQAFFSKF
ENTGSTKKCSSVISSITTTPLPGGGVKSCSLVRERQPELEDVIKLSSCCGPWFDSNAYPS
ANLSTPRITSLNNVSQVPETANFSSPVQVPVLTDNLMTMATRFDTSKDVKNLCCRKCGHH
LSAYDNPRATYQLETLEKKYLASLAMTATPLLRVIIMEAQHLHSYLNDNPGGQAFRERNA
CSSGVWIEEDGCVFKPIVCGWCTDLDVCLGAHILAADPANMKYAGKVVLFLDSIETSDCS
PKQVEQTQFSVDTPVLKRPLVTSLTATGKEYAQLLAWTTNWRCQ
NT seq 3015 nt   +upstreamnt  +downstreamnt
atggaggctcagcagtatgtctatcaaatctgtggagtcaaggtcgagtttccatacagg
gcctatggatcgcagctcgcctttatgggaaaggttataaccacactggagagggctttc
cgggatccagacggccactgcaatgcgctcttggaatctcctaccgggtctggcaagtcc
ttgtctttgctgtgcgcggccttggcgtggcagcagcaccgaatggtagcagcagcttcg
attggtcctgctacgcagtttggtggtggttttattcccgagggaccagcttcaggtgcc
gaggataagcaccaagcaaagaaaaacaagccacctacaatttttttcgcaacgaggaca
cattcgcaaatctctcagattgtgcacgagctgaaaaagacgaactatcgtgttccaatg
gctatattggctgcaaggaaacactattgcacaaatcaacacgtgtgcaagaaggcaaac
ttggacgatgaatgtaaagtgcttctgaaggatccacacaaagcctgccctcagtttaaa
aatgtgaataaattgaagcatcacccggcgctacgcaaaggaggatgccatgaaactcat
gacattgaagatctggtgaccttggctcgttcagttagaggatgcgcatacttcacttcg
agaataatggctgcagatgcccagattgtcttctgtccatacagttacattcttagtcca
atatttcgaaaagcgatggacgttgatattcggggagctattatcatttttgacgaggct
cataacatcgaagacatgtcacgggaagccggtagtgttgacttggatacaagcattcta
gaagcttcttctgaagaactccgaaatgaactcgaggaactaagctcgtccgaagactca
catgatctgtaccgtcctttgtttgatatggtccaggaacttctcatttggatacggcag
caggatgagaatcttcagaggaaggaagtcgaccactattattcgaactggacaggtccg
aagggactagaacaactccaagctgctgggatttcatctgaatcgttttctatacagtta
gactgtgctgtgaaggctgcgggagctgcatccgatccagatccagaaaagcctcatctg
agtggacgttgtgcaagtgcaatggaaggtctcttttgtgcgctgaagttcatgctgtca
aaaccggaatacattcacgactatcagatagtggtgcagagggtcttaaacaaagtcgaa
ggtactgacgaatggctacacaaactgagcttctggtgcctgaatccaggggttgttttt
aacgagattgcaacaatttgcaagtctgtcgtacttacgtctgggactttgtccccaatg
ggttcgtttgcttcggaacttggcacttccttcgaaatggttatggaagcgccgcatatc
atagacttaaactcacagctgcttgtgtctgctgtttccttcggtccaggaaatgtaccg
ctcaatgcaagctaccaatatgcaaacacagtcgcttttcaagatgccctgggaactgcg
ttggagcaaatatgcaatatagttccggatggcgccctcgtgttttttccaagctataag
cttttacaacgagtctgcaacagatggaaaactactggtcagtggaagagaattttggac
attaaaagtgttttcgttgagccgcaaggaagcactgggaagtttgaagacattttgaag
gatttttacaaggttatcaagggagaaaatgtagagccttccagacggaaaagaatccta
acgccgaagaacttcacttccgcaggtggtcagactggagctgcctttctcgcagtctgc
aggggaaaggtggtcgttggtattccttttccaaatctaaatgacgtccaagtcgctatg
aaaaagaactataacgacaaccagaaaactcttaaaagtcttctaggtggtgatcaatgg
aatgtcacaggtcgttgcattagacaccgtggtgactatggtgcaattgtgctgttagat
gagcggtttaataaggcaaattataccggttatatgtccaagtggttaagaaagtctatc
atgagaccggcaagttttcaggaagctctaagggatttacaagcctttttcagcaagttt
gagaatactggctctacgaagaaatgctcttcggtgatctcatccatcacgacaacaccc
ttgcctggaggcggcgtcaaatcctgctcccttgtgcgtgaacgacaacctgaactcgag
gatgttatcaagctgtcctcatgctgcggtccatggttcgattcaaatgcttatccatct
gcaaatttatcaactcccagaatcaccagtctaaacaacgtgtctcaggtcccggaaacg
gctaatttttcatcacctgtacaagtgccagttttgacggacaaccttatgaccatggca
actcgtttcgacacttcaaaagacgtcaagaacctctgttgccgcaaatgtggccaccac
ttaagtgcctatgacaacccgagagcaacgtatcaattggaaacactagagaagaagtat
ctagcatcactcgcaatgactgcaacgcctctgttgcgagtgatcatcatggaggcccag
catctgcacagctacctcaacgataatcccggtggacaagcttttcgggagagaaatgcg
tgttcttctggggtatggatcgaagaggatggttgcgtgttcaagcctattgtatgtggc
tggtgcacggacttggacgtctgtttgggcgctcacatcttggctgcagatcctgcaaat
atgaaatacgctggaaaggtcgttttgttcttggattccattgaaacttctgattgcagt
ccaaagcaagttgagcagactcagttttcagttgacactcctgtactaaagaggccactc
gtaacctcattgactgcaacgggaaaggaatatgcgcagcttttagcgtggacaacgaac
tggagatgtcaataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (36)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (5)   
   Pfam (5)   
All databases (54)   

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