KEGG   Selaginella moellendorffii: SELMODRAFT_417998
Entry
SELMODRAFT_417998 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K15407  queuine tRNA-ribosyltransferase accessory subunit
Organism
smo  Selaginella moellendorffii
Brite
KEGG Orthology (KO) [BR:smo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smo03016]
    SELMODRAFT_417998
Transfer RNA biogenesis [BR:smo03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    SELMODRAFT_417998
SSDB
Motif
Pfam: TGT RINGv DUF2704 DUF3720
Other DBs
NCBI-GeneID: 9653274
NCBI-ProteinID: XP_002978063
JGI: 417998
UniProt: D8S4B8
Position
Unknown
AA seq 878 aa
MNFGAALAPVDTPCLLLSTRRGLPSFVSTDLLPELHPDARVLHVNPVHFLEGPPVSTIHE
IGGGHKLLNLQGNALVSLARDSIVSEPDGEGNTKLGAAFNTSSGRRVIGPAKYMELVNAL
KPNVWASIADELPTWVSQRRNKLSVDRTLQWLDKCLGLQSVGENTSFGTIVGGFFIGGFG
LGESPEDRLTLLQSVTDCLPKDLPRIISGLGMPEEILQAVSTGVDIFDSTYPHTLTKGGY
AMTFPLSMDEKPWKFSLEDGAELGADFTKINLRSIAYRCDVTPLKPGCTCYTCQKHTRAY
INHLLNTHEMVAQTLLDMHNIHHYLSFFQAIRDAICGSYFEEFQHWFIGQRRYCESERPE
VHTHTRRERNLDLSSDKTVMISEPEENETRQARKSEVEQCSQDFVAVDVDETAPSAIKQE
LERLHERRPDSLESNGAAEGRVCRVCHLPLEADVSIELGCSCKNELAVAHQRCAATWFTI
KGSKTCEICGRAAENVSFDRAIARRPDHLVMSVELNVEMQEENSYTVKRALCNLLLSLCV
VIPFLPWLFRGARSQGRSTLQQQGQSRNLLCLAFVFGSLWTKQDRDFNRSVRKACCTHVL
FRDTEEMHGIYVVGLKLIMRLFLSLYAEKEFQISPLGREGFMGDSRQENATDLQHAVEEL
DERKEKIGRSPSQELESTSLSLPAPSIGDVSAGSKAQDPEGGFVAIEIQSLSTNPPPPPT
KGGFEEHKPPQPLGGGDEEDARICRVCHLSLGLKRSSDHEEDPGDPVDEGIASSPIELGC
ACKDDLAFAHRRCAETWFKIKGNRNCEICGQLAHNVAAGADDSSCGRHSDEQSDSIFERA
GDPHRPRSFWQHRPICNFVLAFIVVILLLPWLFRIRLF
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgaattttggggcggcgctggcgcctgtggacacgccgtgcctgctgctctccacgcgc
cgaggtttgccatcgtttgtctctacggatttgctgccggagctccatccagatgcgcgc
gttcttcacgtcaatccagtgcatttccttgaaggtccaccagtgagcacaatccatgaa
attggtggaggacacaagctacttaacttgcaaggcaacgcccttgtgtccctcgccaga
gactcaatcgtaagcgaacccgacggagaagggaacaccaaacttggtgcagcctttaat
acatcgtccggtcgccgtgtgattggtcctgcaaagtacatggaacttgtcaacgcattg
aagccaaatgtgtgggcttcaatagcggacgagcttcccacctgggtttcccaaaggcgg
aataagctctcagtggatcggactctgcagtggcttgataaatgccttggtttgcaatct
gttggcgaaaatacatcttttggaaccattgtaggaggctttttcataggcggctttgga
cttggggaaagcccagaggatcgtttgacattgctgcaaagtgttactgattgcttgccg
aaagaccttccacgaattatcagtggcctgggaatgccagaggaaattttgcaagcagtc
tctactggtgtcgatatcttcgacagcacctacccgcatacactgaccaaaggaggctat
gcaatgacctttccactgtcgatggacgaaaagccgtggaaattttctctggaagatgga
gccgagctcggtgcagacttcacgaaaataaacctccgatcaatagcttacagatgcgac
gtgactcccctcaagcccggttgtacctgctatacatgccaaaagcacacgagagcgtac
atcaatcacttgctaaacacacacgagatggttgctcaaactttgcttgacatgcataac
attcaccactacctctcgtttttccaagcaatacgcgatgcgatatgtggctcttatttt
gaagagtttcagcactggtttattggtcaaaggcgatattgtgaaagcgagcgtcccgag
gtacacacacatactcgaagggaaagaaatttggatctctcaagtgacaagacagtaatg
atatcagagcctgaagaaaacgagaccagacaggccaggaaatccgaggtcgagcagtgt
agtcaggattttgttgccgtagatgtggacgaaacggctccatcagcaattaagcaagaa
ctagagaggctacacgagcgacgcccggacagtctcgagtccaatggagcagcagaaggc
agagtttgcagagtgtgccatcttccactcgaggccgatgtctcgatcgagctcggctgc
tcctgcaagaacgagctagcggtcgctcatcaacgctgtgcagcgacgtggtttacgatc
aagggcagcaagacatgcgagatatgcggccgggccgccgagaacgtaagctttgatcgc
gccatcgctcgaagacccgatcatctcgtcatgagcgtggagctcaatgtggagatgcaa
gaggagaactcctacaccgtcaagcgtgctctttgcaacttgctgctgtcgctgtgcgtg
gttatcccgttcttaccgtggctcttccggggagctcgctcacagggacgatcaacattg
caacaacagggacagtccaggaatcttctttgcttagcttttgtttttggctcgctctgg
acaaaacaagacagggactttaacaggagcgtacgaaaggcgtgttgtactcacgtacta
ttccgtgacacggaagaaatgcacggaatctacgtggtgggtttaaagttaataatgcgg
cttttcctaagtttatacgcagagaaagagttccaaataagtcctcttggaagagaggga
tttatgggtgattcccggcaggaaaatgccacagatttgcagcatgcagtggaagaattg
gatgagaggaaggagaagatcgggagatctcccagccaggagctggaatcaacatctttg
tccttaccagcgccaagtatcggtgatgtctcggccggatcaaaagcgcaggatccagag
gggggattcgtggcaatagagatccaatccctctccacaaatcctccgcctccaccgacg
aaagggggttttgaagaacacaagccaccgcagcccctcggtggtggggacgaggaagac
gccagaatttgtagagtgtgccatctctcgctcggcctgaagcgctccagcgatcacgag
gaggatccaggcgatccagtcgacgaggggatcgcctccagcccaattgagctcggctgc
gcgtgcaaggacgatctagcattcgcgcaccgccgctgcgcagagacttggttcaagatc
aaaggcaacaggaactgcgagatctgtggccagctcgcccacaatgtggctgctggcgcg
gacgattcgagctgcgggcgacacagcgacgagcaatcggactccatattcgagcgggcg
ggcgatccccatcgcccacgcagcttctggcagcacaggcccatttgcaactttgtgctc
gccttcatcgtcgtcatcttgctcctgccctggctcttccggatccgcctcttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (46)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (62)   

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