KEGG   Selaginella moellendorffii: SELMODRAFT_421246
Entry
SELMODRAFT_421246 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K10739  replication factor A2
Organism
smo  Selaginella moellendorffii
Pathway
smo03030  DNA replication
smo03420  Nucleotide excision repair
smo03430  Mismatch repair
smo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SELMODRAFT_421246
   03420 Nucleotide excision repair
    SELMODRAFT_421246
   03430 Mismatch repair
    SELMODRAFT_421246
   03440 Homologous recombination
    SELMODRAFT_421246
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smo03032]
    SELMODRAFT_421246
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_421246
DNA replication proteins [BR:smo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    SELMODRAFT_421246
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     SELMODRAFT_421246
   MMR (mismatch excision repair)
     SELMODRAFT_421246
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     SELMODRAFT_421246
SSDB
Motif
Pfam: RPA_C tRNA_anti-codon RMI2 CDC24_OB3
Other DBs
NCBI-GeneID: 9633917
NCBI-ProteinID: XP_002981721
JGI: 421246
UniProt: D8SEG6
Position
Unknown
AA seq 279 aa
MYGDNAAMDFGGGGFMPSQPSGFATGGGDPSVKKSGAPSSGLFPLTVKQMSRAIQSSTDD
NLIVDGQSMSNVTMVGMLLGKEERATDISFMLDDGTGRVEVKRWIESPDAPEALQLHSIQ
HGQYVRIHGHLRTFQNKRTVVAFAVKPITDFNEITFHFLDCIFAHTYNTKSQGAARPDGP
ASPPTFNHTNYSNPVSNPYATPAAPANSNGMSECQRRVQAVFEEPSVKESEQGLHVDEIA
RRITGFSKKQVRDAVEFLVNEGYVYSTVDDEHFKSTNTY
NT seq 840 nt   +upstreamnt  +downstreamnt
atgtatggggacaatgcggctatggattttgggggcggggggttcatgccctcgcagccc
agcggcttcgctactggaggcggcgatccatccgtgaagaaatctggggctccaagcagc
ggtctctttccgcttactgtgaagcagatgagccgggcgattcaatcgtctactgatgat
aatcttattgtggacggccagtctatgagcaatgtcacgatggtggggatgttgctcggg
aaagaggaaagggcgacggatatttccttcatgcttgacgatggaactggcagagtcgaa
gtgaaaagatggatcgagtcaccggatgctcccgaggctttgcagctacacagcattcag
cacggacagtatgtacgaattcacggacaccttcggacgttccagaacaagagaacagtt
gtcgcttttgcagtgaagcctatcacagacttcaacgagatcacgttccacttcctggac
tgcatctttgcacatacctacaacacgaaatcacagggggcggcaaggcctgacggtccc
gcgtctcctcccactttcaatcacacaaactattccaatcccgtatccaatccgtatgct
actccagcggctcctgcgaattccaatgggatgagtgaatgccaacgccgggtacaggcg
gtttttgaggagccatctgttaaggaaagtgagcagggccttcacgttgatgagattgcg
agacgcattactggtttctccaagaagcaagtcagagatgcggtggagtttctggtgaac
gaaggttacgtttattccactgtcgacgacgagcatttcaagtccaccaacacttactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (134)   
   KEGG ORTHOLOGY (1)   
   RefGene (128)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (151)   

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