KEGG   Selaginella moellendorffii: SELMODRAFT_443756
Entry
SELMODRAFT_443756 CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14310  nuclear pore complex protein Nup205
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_443756
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_443756
   03036 Chromosome and associated proteins [BR:smo03036]
    SELMODRAFT_443756
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SELMODRAFT_443756
Chromosome and associated proteins [BR:smo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    SELMODRAFT_443756
SSDB
Motif
Pfam: Nup192 ATG17_like Nup188_N-subdom_III
Other DBs
NCBI-GeneID: 9653231
NCBI-ProteinID: XP_002978215
JGI: 443756
UniProt: D8S446
Position
Unknown
AA seq 1797 aa
MVSYRRLQSTVEVALAGSPSPQQRTELFHMLHLCRPDFESFLLYPEPKAADRTEVLSKEV
KLPDAPPTVLDDQDVQIALKLSDDYHLNEIDCVSLLVAAHQEWNLLGREPLEGLRLSAGL
WFTERRALINSLQLILRAVVLDEELDPDLVVDLRQYIESLIDAGLRKRLVTLIKELGRED
PSGLGGPGVEPYVMDARGALVLRHDVALRERLSICQCLVFSCLIVRINSQEAKDIYGLVK
DCSGDAFSSQSVVKLQIAYTVMFTLAISLISDALGGGHEMGSVLSPDAVFRREFHNQVME
VGLESTTKGFTDVIRLVWGVFLMSNVDTSGISINESQSDITNARACLDHACEQNVFKFLV
EKILKAAAFENDDPDLVFMYNAYLHKLFIIFLSNPIGREKIKDLKNVAMFSDPYPTEEPM
EDDLITRRQAMQTQADPFISLLELISEVYQREPALVSDNEVLWNFIRFISEDHSSYLTLV
AFLKMLVGLACSEEGARQVYQMLQNKTFRTEGDAKALDAYLQVLKKVLEAGSEVERSLWF
PDIEPLFKLLPFENVPPYLKGSLRNAISAFVPLSPVIRDRVWSLLDAYDLPLSAATTLGG
ANVQQVYDMTFELNEVEARQEEYPSTISYLNLLNVLMANDPDKSHKGQKFAGIFKFVRDQ
VFGPYAQRAYADPTYKWQMVVASLRHFQMMLTLYDVSEGDLQNSLEGSEQSFGGAKLYLP
PIEIMKDLMGGKSIFRSLMSIVMLGADFVLEERISKNYGPSLEEAVQLCLELLVIAFQKD
IFYADHWRPIYQTIDAILSHDSRQIITLIQYIHYESLSTIQHLSIKIMDVFRCDCFTPSN
CAKRVLLDSSRLPHIVSLIVDANAAANLVEDYAACLEARSHELQTSDCVKEDSGSLILRI
NLLNGQSFNQNAYTVLQLVYELCVDEFTSGPMLDLMRTEKYDFFSCHLDSACEPLPKRET
NHSLRISSLQQRAWLFKLLALDLHVSDMDVLSHRRSCRRLVGKLFMDESVDPLPVTNAVP
ALLTNYGLQKMKVLELLDILQFPLAEPPTEIPQCIEDFKEDLKVEEILNNPALVDDGGIY
TLSERGDRIIDLTAFRDKLWQACKRLEMQYNILANERRQVAVRDAVQQLLRWAWKRNKFL
EEQAAQLHMLVGWTQLVEVTFSRRFEFLGNRIQVIYDTLEAVLDASCSSDCSLSMAYVLS
QVVLTSMAKLQDHGIFAPGEEDYNDDAIYGDVLTTVRLPNTACQTILSKLLTGVLRPESS
EALRRRQFASLLSYFHYCQGMVNSELSVSMMRGLLMEGQDGVEDTEFEKLEGDQAELAQM
NFNMLRQEATALLDLVCKDALHGSETAKAIAFYVLEALVAVDRNQVKKSLHVFSLFSNFS
NIQALILPSRDMIRRLYTLEAELALLLRVCFHNKKRGAQALFAMGAIQHLSSCKAIDVQL
TDDARKEHMGIGLPSQHDRQHQIVIPVLRLILCFTTLIDTGRKDRDEVALEVLEFVKLHH
GLFDRILRDDGTKMYLADLEELHLATAILSKVWPFEGSEDFGFKQGLFNLAYIYFAQDNQ
SRSGFIQFSKSQRQNMGVPAEDSKKIELLVTRLRGNLVSYIHTLVSKQGMRLNISGTDSS
EVVMRHYTLGLQRQPSLKLVSSLLEQAALDLESSAEEKMLIVAKLPDINELTRQEVDDIA
KSKQGSEMESMRKRRYLAMVEMCTDASIRDTQIACLVLVVEQALEILYLHVEAIQQAAQG
AEDSMQAQKGELDALGQKLLPTFEKLESIKEDKVGRGVKHIHRLIYSLKSQTRRYFD
NT seq 5394 nt   +upstreamnt  +downstreamnt
atggtttcttacaggcgcctgcaatccacagtggaggtggcgctggcaggatcgccatcg
ccacagcagcgcacggagctcttccatatgctgcatttgtgccgcccagacttcgaatca
ttcctcctctatccggagcccaaggcagccgatcgaacagaggttttatcgaaagaagtg
aagctgccggacgcgccgcccaccgtgctcgacgatcaggatgttcaaattgctttgaaa
ctcagtgacgactatcatttgaatgagatcgattgcgtgagtcttctcgtcgctgctcat
caagagtggaatctcttaggacgtgagcctctcgagggcctccgactatcagcagggttg
tggttcacggaaagaagagcgctaatcaactccttgcagcttattctgagagccgttgtg
cttgacgaagagcttgatccagacttggtcgttgatcttcgacaatacatcgagagtttg
attgacgctggactacgcaagcgacttgtgacacttatcaaggaacttggtcgcgaagat
ccatctggcttaggcgggccaggggttgagccttacgttatggatgccaggggagctctt
gtgctacgtcatgacgtcgcgcttagagaacggcttagcatatgccagtgtttggtcttt
tcatgccttattgttcggatcaattcgcaagaagcaaaagacatctatggtcttgttaag
gactgttcgggagatgcattttcgtcacaatccgtcgtcaagcttcagatagcgtacaca
gtgatgtttacccttgcaatctcgttaatatcggacgctctcggtggtggtcacgagatg
ggatctgtgctttcgccagatgctgtatttcgccgtgagttccataatcaggttatggag
gtggggcttgagagcacaacgaaaggttttacagatgtcattagactagtatggggggtc
ttccttatgtctaacgttgacacgagcggtatttcaatcaacgaatcacaatctgatata
acaaatgctcgagcatgtcttgatcacgcttgcgagcagaacgtttttaaattcctcgtt
gagaaaattttaaaagctgccgccttcgagaatgatgatccagatcttgtgttcatgtac
aatgcttatttgcacaaacttttcataatatttttgtccaatccaatcggcagagagaag
atcaaagatttgaagaatgtcgccatgttttctgatccgtatccgaccgaggagccaatg
gaggatgatttgataacacgccgtcaagctatgcaaacacaagctgatccttttatatct
ttgctcgagcttatatcagaagtctaccagagagaaccagcacttgtttctgataatgaa
gttctttggaacttcataagattcataagcgaagaccattcaagctaccttacattagtt
gcttttctcaagatgctggttggattggcttgcagtgaggaaggggctagacaagtgtac
cagatgctacagaacaagactttccgtactgagggagatgccaaagctcttgacgcctat
ttgcaagttttgaaaaaggtcttggaggctggtagcgaggtggaaaggtcactctggttc
ccggatattgaaccgctttttaagcttctcccatttgaaaatgttccaccgtatttgaag
ggatctttgcgaaatgcaatctctgcctttgttccgttatctccagttataagagacaga
gtatggagcttgctggatgcttatgatcttcctctgtcagctgccactacattgggagga
gccaatgtgcaacaagtttacgacatgacgtttgaactgaatgaagtggaggcaaggcaa
gaagagtatccctctacaatttcatatttgaacctgctgaatgttctgatggcaaatgac
cccgacaagtctcacaagggccaaaaattcgctggcatattcaagtttgtccgagatcag
gtgttcggtccgtatgctcaaagggcctatgctgatcccacatataaatggcagatggtg
gttgcatcccttaggcacttccaaatgatgctgacgctatatgatgtgtccgagggggat
cttcaaaattccttggaaggatctgagcagagctttggcggagcaaagctgtatcttccg
ccaattgaaataatgaaggatttgatgggcggaaaatctatcttccgaagtctcatgagc
attgttatgcttggagctgattttgtactggaggaacgcattagcaaaaactatggtcca
tctcttgaggaagcggtgcagctttgtttggagcttttagttattgcctttcagaaagat
attttttatgccgaccactggcgaccgatttatcagactatcgatgctatattgtcgcat
gacagccgccaaatcataaccttgatccagtacatccattatgaatcgctatcaactatc
caacatctgtcgatcaagatcatggatgtctttaggtgcgattgttttacaccatcgaat
tgcgctaaaagagttttattggacagttcgcgattgccacacatagtttctttaattgtc
gatgccaatgccgcagcaaatcttgttgaggactatgcagcctgtttagaagcccgcagt
catgaacttcagacttctgactgtgttaaagaagactcgggctctcttattttgcggatc
aacctgttgaacggacaatccttcaaccaaaacgcgtatacagttctacagctggtgtat
gagctctgtgtcgatgaatttacaagtggcccgatgcttgaccttatgcgaacggagaaa
tacgatttcttttcttgccatttggactctgcttgtgagccacttcctaagcgagagaca
aaccattctttacgtattagcagtttgcagcagagagcatggctttttaagctattggca
ctggatttgcatgtcagtgacatggatgttttgtcacatcgtcggagttgtcgtcgcctt
gtggggaagctttttatggacgaaagcgtggatcctctgcctgtgacaaatgccgtgccg
gcgttgcttactaactatggccttcaaaaaatgaaggttctggagctccttgatatcttg
cagtttcctttggcagagcctccaaccgaaattccacagtgcatagaagactttaaagaa
gatttgaaggttgaagagattctgaacaatccagcattggtcgacgatggtggcatctat
acgctttcagaacgtggcgacagaataatcgatctgactgctttcagggacaagctttgg
caggcgtgcaagaggctagaaatgcaatataacattttggcaaatgagcgacgacaagtg
gcagtacgtgacgccgtgcagcagctacttaggtgggcatggaagcgcaacaagtttttg
gaagaacaagctgcacagttacacatgcttgtgggatggacacaactagtagaggtgaca
ttctccagacgatttgagttcttagggaaccgcattcaagtgatctatgacacgctggaa
gcggttttggacgcaagttgttcttcagactgttctttgagcatggcttatgtcttgagc
caggttgtgctgacatcaatggcaaaacttcaagatcatggtatatttgcgcctggtgaa
gaagattacaatgatgacgctatatatggagatgttttgacaacggtccgtttacccaat
accgcgtgccagaccatcctctcgaaactccttaccggtgtattgcgacctgagtcatct
gaagctttaagacgaaggcaatttgcatctttgttaagctattttcattattgccaaggc
atggtaaattcggaactttcggtttccatgatgcggggacttttgatggaggggcaagac
ggcgttgaggacacagaattcgaaaagctagaaggggatcaggccgaacttgctcaaatg
aactttaatatgcttaggcaggaggctactgccctgcttgacttggtttgtaaagatgca
ttacatggaagtgaaacggcaaaggccattgcgttttatgttctagaggcacttgtggcg
gttgatcgtaatcaggtgaagaagtcattacatgttttctcgctgtttagtaacttctcg
aacatacaggctttaattctgccttctcgtgacatgatccgacgtctatatactctggag
gctgaattggcattacttttaagagtgtgttttcacaacaagaaacgaggcgcgcaagca
ttgtttgccatgggtgccatccaacatctgtcatcctgtaaagctattgatgtccagctg
acggacgatgcgagaaaggagcatatgggaattggactcccatcacaacatgacaggcag
catcagattgtcatacccgttctgaggttgattttatgttttacgacgctaattgacaca
ggaagaaaagatcgcgatgaagtagctcttgaagttctagagtttgttaaacttcatcat
ggtttgttcgaccgtatcttgcgagacgatgggacgaaaatgtatctggcagacctggaa
gaactccatttggcgactgcaattttatcgaaggtgtggccattcgagggctctgaggac
tttggcttcaaacaaggcctgttcaatttggcatacatatatttcgcgcaggacaatcaa
tcacgtagtggattcattcagttttctaaaagccaacgtcaaaatatgggggtacctgct
gaggactcaaagaaaatagagcttcttgtgacgcgccttcgtggcaatctggtttcctac
attcacacattagtcagcaagcagggaatgagattaaacatctctggaacagacagttct
gaggtggttatgcgacactacaccttgggacttcaaaggcaacccagcctcaagcttgtc
tcaagtcttttggaacaggcggctttagatctcgaatcttctgcggaagagaaaatgctt
atcgtggctaagcttcctgatattaacgagcttacaaggcaggaagtcgatgacatcgca
aagtctaagcaagggtccgaaatggaaagcatgcgaaagagaaggtacttggcaatggtg
gagatgtgtacagatgccagcatccgcgatactcaaatcgcttgccttgttctcgtcgtg
gagcaagctttggaaatcctctacctccatgtcgaagcgatacaacaagctgcccaagga
gccgaggattcaatgcaggcacagaaaggcgagctggatgctcttgggcagaagctactc
ccaacgtttgagaagctggagtccatcaaagaggacaaggtgggacgaggagtgaagcac
atccacaggctcatttactctctaaagtcccaaactcggcggtacttcgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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