KEGG   Selaginella moellendorffii: SELMODRAFT_89304
Entry
SELMODRAFT_89304  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K07466  replication factor A1
Organism
smo  Selaginella moellendorffii
Pathway
smo03030  DNA replication
smo03420  Nucleotide excision repair
smo03430  Mismatch repair
smo03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SELMODRAFT_89304
   03420 Nucleotide excision repair
    SELMODRAFT_89304
   03430 Mismatch repair
    SELMODRAFT_89304
   03440 Homologous recombination
    SELMODRAFT_89304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smo03000]
    SELMODRAFT_89304
   03032 DNA replication proteins [BR:smo03032]
    SELMODRAFT_89304
   03400 DNA repair and recombination proteins [BR:smo03400]
    SELMODRAFT_89304
Transcription factors [BR:smo03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    SELMODRAFT_89304
DNA replication proteins [BR:smo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    SELMODRAFT_89304
DNA repair and recombination proteins [BR:smo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     SELMODRAFT_89304
   MMR (mismatch excision repair)
     SELMODRAFT_89304
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     SELMODRAFT_89304
SSDB
Motif
Pfam: Rep_fac-A_C Rep-A_N REPA_OB_2 tRNA_anti-codon CDC24_OB3 DUF5521 zf-like
Other DBs
NCBI-GeneID: 9631291
NCBI-ProteinID: XP_002968459
JGI: 89304
UniProt: D8RAZ5
Position
Unknown
AA seq 636 aa
MAQPSLTPNAIVALLGGDLELRPIVQVLDVKQIGSNQNVQERYRLVLSDGTAVQQAMLAT
QLNEVVKNGTLMKSSIVKLQEYICNTVKDRKIVIVLNLDVLAEATSFGGRPTETNSLGGR
AAEGSSIGGRTPEPGSFGGQATPAVSPYGRPAEARRETIAYGGRPAESMGSYAPNPPYGP
PPTYTNRGPIARNEGPPGLVPIAALNPYHGRWTIKARITSKSDLRRFNNARGDGRVFSFD
LLDAEGGEIRVTCFNNVADEFYERAQVGRLYMVSKGSLRAAQKQFNHLKNDWEIMFEKDS
VLDPCPEDSSVPQQVFDFKQVSEIENLPNNAMVDAIGVVVGVNQTTTIMRKNGTETQRRT
LQLRDRSGKSVEITMWGNFCTQEGQHLQELCDSGQSPILAIKAGRVSDFSGKSLGTISST
RFQINPDHPEARSLQLWFEREGRHAQAQSISREGAGGGGRTENRKTVSQIKDEGLGRSEK
PDFVTIRATIHFIKTDSFCYTACPLQIGDRQCSKKVTNNGDGTWRCERCDRTVPECDYRY
MLSIQVMDHTGATWLTGFQEAAEELLGVKAKDLFMWKQEDNGRFLDHIASIQFTQHHFKV
RIKEESFNDEQRVKVNIQRAEKLDFVAESKYMIDAI
NT seq 1908 nt   +upstreamnt  +downstreamnt
atggcgcagccgtctctcacccccaatgcgattgtggcgctcctgggaggggacttggag
ctccggcccatcgtccaggtactggacgtgaagcagattgggtcgaatcagaacgtccaa
gagcgctatcgcttggtgctgtcggatgggaccgctgtgcagcaggccatgctcgccacg
cagctcaacgaggtcgtcaagaatggaaccttgatgaagagcagcatcgtgaagcttcaa
gagtacatttgcaacaccgtgaaagatagaaagatagtgattgtcctcaacttggatgtt
cttgcagaggctacctctttcggtggaaggcctacagagacaaactctctaggtggaaga
gcagcagaggggagctctatcggtggaagaacaccagagccgggttcttttggaggacaa
gcaactcccgctgtgagtccttatggaaggccagcagaggctagaagagaaacaattgcg
tacggtggaagaccggcagagtctatggggtcttatgctccgaatcctccatatggaccg
ccgccaacttacacgaatagagggcctattgcaaggaacgaggggccgcctggacttgtt
cctatagcagctttgaacccgtatcacggccgctggacgatcaaagcgaggatcacttct
aagagcgacctccgtcgcttcaacaacgcccgaggtgatggcagggtgtttagcttcgat
cttctggatgccgagggtggtgagatcagagttacttgcttcaacaacgttgcggacgag
ttttacgagcgtgctcaggtcggtcggttatatatggtctccaaaggatccctccgagcg
gcacagaagcagttcaatcacttgaagaacgactgggagattatgttcgagaaggattca
gtgctcgacccgtgtcctgaggactcgtcagttccgcagcaagtgtttgacttcaagcag
gtcagtgagatcgagaatctgccgaacaatgccatggttgacgccattggagtggtggtc
ggggtcaaccaaacaacgactataatgagaaaaaacggtacagagacacaacggaggacg
ctgcagcttagagacaggtctggcaagagcgtcgagatcacaatgtggggcaacttttgt
actcaagaaggacagcacctccaggagctatgtgattcaggccaaagtcccatactggca
atcaaagcaggtcgagtaagcgatttcagcggaaagagcctggggactatttcctcgacg
cggttccaaatcaatcccgatcatccagaagcacgttccctgcagttgtggtttgaacgc
gagggtaggcacgcacaggcgcagtctatttccagggaaggagcgggcggtggtggtcgg
acggagaaccggaagacagtgtcgcagattaaagacgagggacttggcagatcggagaag
ccagacttcgtcactataagagcgaccatccactttataaagacggacagcttctgctac
acagcatgcccgctgcaaattggagacaggcagtgcagcaaaaaggtgacgaacaatgga
gacggaacttggcggtgtgagcggtgtgaccgaaccgtccccgagtgcgactacagatat
atgctctccattcaagtgatggatcacacgggcgctacctggctcactggcttccaggag
gccgcggaagaactcttgggcgtgaaagccaaggacctctttatgtggaaacaggaggac
aacggccggttccttgaccacattgccagcatccagttcacccagcaccatttcaaggtc
aggatcaaggaagaaagtttcaacgacgagcagcgggtcaaagtaaatatccagcgagcc
gagaagttggatttcgtcgcggagagcaagtacatgattgacgcgatc

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (38)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (65)   

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