KEGG   Selaginella moellendorffii: SELMODRAFT_99561
Entry
SELMODRAFT_99561  CDS       T01496                                 
Name
(RefSeq) hypothetical protein
  KO
K14314  nuclear pore complex protein Nup210
Organism
smo  Selaginella moellendorffii
Pathway
smo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:smo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    SELMODRAFT_99561
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smo03019]
    SELMODRAFT_99561
Messenger RNA biogenesis [BR:smo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     SELMODRAFT_99561
SSDB
Motif
Pfam: Big_2
Other DBs
NCBI-GeneID: 9642161
NCBI-ProteinID: XP_002973686
JGI: 99561
UniProt: D8RR69
Position
Unknown
AA seq 1951 aa
MANAGIRNTLLLASAILFLFLGLLPARGGRPHISNLNVLLPPRTTTPVRYRLQGTDGCFV
WTWDHHDIISLVPEYNGTSSDCSTSALITPLSPFEERQATAVHATDTVTGEILRCEVFID
KISRIQIFHHSVKLDLDGWATLRIRAFDAEENVFSSLVGLKFAWQLSSFDPAGETLPQKL
LHVPLKDSPLSDCGCMCGDLGTQIELEDQGFGSDLYVVRGVSTGQERVKARLVEPRMEEL
DDTLVLTVAEAISLEPHSPLYIIPGTSFRFKLKAMRKNVLSEIPLPSVYHKWSVTNEAVA
SVDQHSALIAAKVVGVTNVIVEDVRVKGHQQMATVHVVIPTRLELHLLPLYKKEAHSRKL
DVEGRVSGETWYIVSGREYVVNVRAFALDSARALYLTQSNDLRLLFTYLPYWEAVEVPED
VSSEHGWQNATLLKANTEGAGTIVAKLVYNVDSDVKVLCIVQAVVVCPPVLIALERATSV
RAVFLPWSPGSSQEYQLKAEGGCGDISSDYVWSSTNPSVATVNALGKILSKGPGKTVIRA
SSAKDLLNVDEVIIHVEVSVPSSITVVHGLPVEVEINTILPVAVSLTTPAGHAYSRCDVY
NSFVQWDLFGVDGNFKFVDSSGPFTLSDISSYLRPEESSSQVVCAWNAILPLRPGRATVT
GSLKVSTVEAAAALETSWAIASYAPLALQQVSDGNSCGGYSCSDTSGQSTCHNLKELLLV
VGSGIKVMLVGGPERWRQESQFLEFHEIVSSEAGGKASEEVLVTRSTDGGGRVFFVGCSD
FGNYTLIFRRGYQDLEGPVNVVASSSLLVVCDVPSSIVLIIDESDNSQHIIKSVVQLERD
QERKRLLPVTVLNSRSIRVAALGLHSSGRPFANTSSMALSWHLDECDALAYWDDLDMPPD
RWERTLGLQNTVGLCAVRATLTHLKQSKLPVLTVVAAASLLKQAKPFLHDAAQLQLVAAL
RLEPKETLLFGHPDAKATLQVLGGTNDIESHVNDSRIAVVIHPPTGPRVSHLVVAARAMG
IAVVSILDVGLASPASANALVHVVDISWIKVVPDVVTMELGTMLEVHLQVGDSTGRTFDP
SQFVLFNIHVHLQDEIISLVNQTSTRVPGNSFYIQGADIGFSSFHVTAQKATGREIHSTV
VKAEVYAPLKVIPSPLLMAPGAQFMLVVHGGPRTGKVVEFSSSESLIAVVDRNSGLVTAK
SAGNEVILARAFDNDGNLLGEAFTEITVAIPVSMYLEVRGGQLGTGREMSIYPFSNEGNL
FSFFEMCTNYEWLVADEESFWKVSSFLCCLKNTDNFMCFRSAGMTTVSVSFICQFHTLGG
HSVPKNYSASGSISVIPDPPLALGMLATWVLPPGHRSSKLLPQRVVDGLTTRAITYTLMH
DGVAGSEIFTIDDGRINTADRMDVACIHAKDRDAGRSEIAVCVRVAEVAQMTVGDRVHVS
ELSVGTQHTFIVNLRDNIGTPFFEVDLESLPLSLETNRADVVSLKATKLEASGGSTTALR
QGKALIRISQKQKVDIADYILVFVGAYVYPRNPVMRIGDRVNFSIAGKGFLSSGVSSLDR
GQWSSGNEHIVLVNSRTGEAEALSEGSTVGKDVLVLTRWDVVGISTVTVEAPSFPFVTNA
PFPDQGYKFTVKFKDTHGDDVGVIGESRPISYDCKVDPSFIGRAAPWHDPDSGTFYCLFF
PYAPEKLSYNLHQELKSKRATRDRGDAKGRIGMSVTAVLSRTPSVAGSADCTFAGGFSII
DTPSQLQLSVTSNKSRIAVVGTVAIAVSWQRKDAVEVKRLTRTEEPGVCGHAVYEVLLLE
EDKSFTDKLVFLLTTTGQREEISMAYDAGQFNVAALSQQIFTVAVITLVAIVLPVFLCTK
LLDLPRSLRSSPATPSPTRRRPLVAQVVQDDGASGVLVNGAVDDTIQTPVQYRTYSRTPP
QPYTEYVSRTIEQTPYYSRQGMRRTDPSKTY
NT seq 5856 nt   +upstreamnt  +downstreamnt
atggcgaatgccgggatcaggaatacactgctgctagcgtcggcgattctgttcttgttc
ttgggattgctgcccgcgcgtggaggaaggcctcacatcagcaatctcaatgttcttctt
ccgccgaggacgacgactccagtgcgctatcggctccagggaaccgatggctgcttcgtt
tggacttgggatcatcacgacattatctcgcttgttccagagtacaacggcacgtccagc
gattgctcgaccagcgctttgatcacgccgctttctccattcgaggagaggcaagcgacg
gcggtccatgccaccgacactgtcacgggggaaattctgcgctgcgaggtcttcatcgat
aagatctctcggatacaaatatttcatcactccgtgaaactcgatctcgatggatgggcg
acgctgcgcattcgtgctttcgatgccgaagagaatgtgttttcatcgctggtgggattg
aaattcgcgtggcagctatcttcgtttgatcctgctggtgaaacgcttcctcaaaaatta
ctacacgttcctctcaaagacagtcctttgagcgactgcggctgtatgtgcggagacctt
ggtactcaaatagagttggaggaccaggggtttggatctgatttatacgttgtccgagga
gtgagtactggacaggagagagtaaaagccaggctagtggaaccgagaatggaagagctg
gatgatacattggtcttgactgttgccgaggcgatctctctggagccgcactctcctctg
tatattattccgggaacgagctttcggttcaagttgaaggctatgcgtaaaaacgtctta
tcagagattccattgccttctgtatatcacaagtggtctgttacaaacgaggctgtcgct
tcggttgaccaacacagcgctcttattgctgcaaaagttgtgggcgtaacgaatgttatc
gtggaagacgtcagagtgaaagggcatcaacaaatggctactgtgcatgttgtcattccc
acaagactagaacttcacctcctacccctttacaaaaaggaagcgcattctcgcaagctg
gatgtagaaggcagggtatcaggggaaacttggtacatcgtgtctggcagggagtacgtg
gttaatgttcgggcgtttgctctcgactccgctcgcgctctttacctgacgcagagtaac
gatttgagacttcttttcacgtacctgccgtactgggaagctgttgaagttcccgaagat
gtttcatccgaacatggatggcaaaatgcgacgttgctgaaagctaatactgagggcgct
ggaactatagtggctaaacttgtctacaacgttgattctgatgtgaaggtgctttgtatt
gttcaagcagttgttgtgtgcccccctgttttaatagctctggagcgtgcaacaagtgtc
cgcgctgtatttcttccttggagcccaggatcttcgcaggagtaccagttaaaagctgaa
ggaggctgcggagatatatctagcgattacgtatggtcctcaacgaatccaagcgtcgca
actgtgaatgcacttggaaaaattttgagcaaaggacccgggaaaacagtaattcgcgcg
tcgtcggcaaaagacttgctaaacgttgatgaggtaataatccacgtggaggtgtctgtt
ccatcatccatcactgttgttcatggtcttcctgttgaagtcgagataaacaccattctt
ccagtcgccgtgagcttgacaacgccggctggtcacgcttactccagatgtgacgtctat
aatagttttgtgcaatgggaccttttcggtgtggacggcaacttcaagtttgtggattca
tcgggtccatttacattatcggacatctcatcttatttaaggccggaagaaagctcctct
caagttgtatgtgcatggaacgcaatcttgccattgcgaccaggcagggcaaccgtcacg
ggatccttgaaagtttcaactgtcgaggcagcagccgctttggaaacgtcttgggcgata
gcttcgtacgctcctctagctctacaacaggtctcggatggaaattcttgcggtggatac
agctgtagcgacacttccggtcaaagtacatgtcacaatttgaaggagctgctacttgtt
gtggggagtggcatcaaggtcatgctagtaggtggccccgaacgctggaggcaggaatca
caatttttagagttccacgaaatcgtttcttccgaagccggagggaaagcgtcagaggaa
gttctcgtcactcgctcaacggatggtggcggacgagtcttcttcgttggctgttccgac
ttcggcaattacacgctcatatttcgtcgtggctaccaagatcttgaaggaccagtgaac
gttgtggccagttctagtttactggttgtttgtgacgttcctagctcaatcgttctcatt
attgacgagtcagataatagtcagcatattatcaagtcagtagttcagttggagcgtgat
caggaaagaaagcgtttgctgccagttacggtattaaacagtcgctctattcgagttgcc
gcactgggtcttcacagttctggaaggccatttgcgaacacatcgtcaatggctctttcc
tggcatttggacgagtgcgatgctctcgcatactgggatgatctcgacatgcctccggac
agatgggagaggacccttggcctccaaaataccgtgggactgtgtgcagtaagagcgact
ttgacacatctgaaacagtcaaaactaccagtgttaacagttgttgcggcagctagtttg
ctaaagcaagccaagccgttcttgcatgacgctgctcaattacaactcgttgcagcacta
aggctggagccaaaggagactttactttttggccacccagacgccaaggcgaccttgcaa
gttctcggaggcacgaacgatattgagtcacacgttaatgactctagaatagccgtcgtt
attcatccaccgactggacctcgtgtatcacacctcgtagttgctgcaagagccatggga
attgcagttgtttctatacttgacgttggtttggctagtcctgcttcagcaaatgctttg
gtgcacgtagttgacatatcgtggatcaaagttgtacccgacgttgtaaccatggagttg
ggaacaatgttggaggttcacctgcaagtaggggatagtactgggcgtacctttgatcca
tcacagtttgtgctttttaacatccatgtccaccttcaagacgaaattattagccttgta
aaccagacgtcaactcgagtaccgggaaattccttttacattcagggtgccgacattggt
ttcagcagtttccacgttactgctcaaaaagctaccggtcgtgaaatacatagtaccgtt
gttaaggctgaggtgtatgctccactgaaagttattccatcgccattactaatggcacct
ggggcacagttcatgcttgttgttcatggaggcccaaggactggaaaagttgttgagttt
tccagctcggagtctttaattgctgttgtggatcgcaattcaggactggtcacggcaaaa
tcggctgggaatgaggttattttagcaagagcatttgataacgacgggaatttgcttggt
gaagcctttactgagataacagtggctatacctgtttcaatgtatttggaggttagagga
gggcagcttggaacgggaagggaaatgtcgatttatcctttctctaacgagggaaatctt
ttctctttctttgagatgtgtacaaactatgaatggctcgttgcggacgaggagagtttt
tggaaagtcagttcatttttatgctgtttgaaaaatactgacaactttatgtgtttcaga
tctgctggtatgaccactgtttctgtgagctttatttgtcaattccataccctgggcggg
cattcggttcccaaaaattattcagcatcaggatcgatctctgtgatccccgatcctcca
ttggcacttggaatgctggcgacctgggtacttcccccaggccacagatcttcaaaatta
ctgcctcagcgggtggtagatggattgacaactcgagcgattacatatactctgatgcat
gacggagttgccggcagcgaaatattcactattgacgatggacgtatcaacacagctgac
aggatggatgttgcctgtatacatgcgaaagacagagatgctggccgatccgagattgct
gtgtgtgtcagagttgcagaggtggcacaaatgactgttggggacagagttcatgtttcc
gaactttctgtcggaacacaacatacttttattgttaatttgcgcgacaatataggaaca
ccgtttttcgaagtagatttggagtctttgccgctgtccctagagacgaaccgtgctgat
gtggtttctttgaaggccacaaagcttgaagcttctggtggttcgacgactgccttgcgg
caaggtaaagcattaatccgtatatctcaaaagcagaaagtcgacattgccgattacatc
ctggtttttgtgggtgcatatgtctatccacgtaatccagttatgcgtattggagatcgt
gtaaacttttccattgctgggaaaggctttctatcatctggtgtttcttcactggaccgc
ggccaatggtctagtggaaacgagcatattgttcttgtgaacagtcgcacaggggaagcc
gaggctctctcggaaggctctactgttggtaaggatgttttggtcttaactcgctgggat
gtggtgggcatatccactgtcactgttgaagctccatcatttccattcgtcaccaatgct
cctttccctgaccaaggctacaaatttactgtcaaattcaaagatacgcatggagacgat
gtcggtgtgatcggcgaaagtagacctatttcttatgattgcaaagtcgatccatcgttc
attgggcgtgcagctccgtggcatgatccagattcaggcacgttctactgtttgtttttc
ccctacgcgccagagaaactttcatataacttgcaccaagaactgaaatcaaagagagct
actagagaccggggtgatgcaaaaggacggataggcatgtcagtaacagcagtgctttct
cgaacgccaagcgttgctgggtctgctgattgtaccttcgctggaggattttctataatc
gacacaccttcacagcttcaattgtccgtcacgtcgaacaagagcaggatagccgtggtg
ggaaccgtagcgattgccgtttcatggcaacgtaaggatgcagttgaggtgaaaaggctc
accaggacagaagagccgggtgtttgcggccatgcggtttacgaggtgctgctgctcgag
gaagacaagagtttcacagacaagttggtctttttgctgactactacgggccagcgcgaa
gagatttcgatggcttacgatgccgggcaatttaacgtggcagcgctgtcccagcagatc
ttcacggtggcggtcataactctggtggcgatcgtcctccccgtgttcctgtgcaccaaa
ctcctggacctcccgcgatctctccgaagctcgccggcgacgccatcgccaacgcgaagg
cggccgctggtcgcgcaagtcgtccaggacgacggtgcctcgggagtactggtgaatgga
gccgtggacgacaccatccaaactcccgtccaatacagaacgtatagcaggactccgccg
cagccttacacggagtacgtgagtagaacgatcgagcagacgccgtattacagcaggcaa
ggcatgagacgaaccgatccttccaagacttactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (27)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   JGI (1)   
   OC (1)   
   PGDBJ (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (1)   
   Pfam (1)   
All databases (45)   

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