KEGG   Sinorhizobium meliloti BL225C: SinmeB_3497
Entry
SinmeB_3497       CDS       T01884                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
smq  Sinorhizobium meliloti BL225C
Pathway
smq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SinmeB_3497
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smq03019]
    SinmeB_3497
Enzymes [BR:smq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     SinmeB_3497
Messenger RNA biogenesis [BR:smq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     SinmeB_3497
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Helicase_RecD AAA_22 UTP25
Other DBs
NCBI-ProteinID: AEG07811
Position
pSINMEB02:complement(23942..25456)
AA seq 504 aa
MSTFKELGLSEHIVATLSANGFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPM
IEKLVADGRRPDPRNIRALVLAPTRELVNQIAANLKLFVKKSPLKIGLVVGGVSINKQTE
QLARGVDILVATPGRLLDLVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKN
RQTLLFSATMPKLIAELAGEYLTDPVKVEVSPPGKAADKVEQYVHFVPGKDLKTTILKQT
LTANPDGLSLIFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVL
VATDVAARGIDIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRD
IEKLMGIQIAVASGEAPADQARPSKGRGGRGNGQPRGNGQSRGNGAGQRQGGPRRDRPQR
QAAAGGFAGDDLLRDERSHERRDQRAAGHGPADGRPEGHRNHKAQKHHGRPGPQQAGRRG
SEQSGERNGGGNRPQRADGRGHQR
NT seq 1515 nt   +upstreamnt  +downstreamnt
ttgtccactttcaaagagcttggcctctccgagcacatcgtggcgacactctccgccaat
ggtttcgaaaagccgacgcccatccaggctcaagccattccgctggtcctgaaagaccat
gacctcatcggtcttgcgcagacgggcaccggcaagaccgctgcgttcggcctgccgatg
atcgaaaagctcgtagccgatggcagacgtcccgatccgcgcaacattcgcgctctcgtg
ctcgcacctacccgtgaactggtgaaccagatcgcggccaacctgaagcttttcgtaaag
aagagcccgctcaagatcggcctcgtcgtcggtggcgtttcgatcaacaagcagaccgaa
cagctcgcccgtggcgtcgacattctcgtcgcgacccccggccgcctgctcgaccttgtt
tctcgcaaggcggtgacgctgacacaggctcgctacctcgttctcgacgaggctgaccag
atgctcgatctcggcttcatccacgacctgcgcaagatttccaagctggtgccgaagaat
cgtcagacgctgctcttctccgcaaccatgccgaagctgattgccgagcttgccggcgaa
tatctgaccgatccggtcaaggtcgaagtctcgcctccgggtaaggccgccgacaaggtc
gaacaatatgtgcatttcgtccccggcaaggacctgaagacgacgatcctgaagcagacg
ctgactgccaatcccgatgggctgtcgctgattttcagccgcaccaagcatggcgccgag
aagctgatgaagcatctcgaccatgtcggcttcaaggccgcctcgatccatggcaacaag
agccagggccagcgggagcgcgcgctgaaggcattccgcgacggtgagatccgcgtgctc
gtggcgacggatgtggccgctcgcgggatcgacattccaggcgtcacccacgtctacaac
tacgacctgccggaagtgcccgacgcctatgtgcaccgtatcggccgcacggcccgtaac
ggccgcgacggcatcgcgatcgcattctgtgcgccggacgaaatccgcctgctgcgggac
atcgaaaagctgatgggcatccagatcgccgtcgccagcggcgaagcgcccgccgaccag
gcgcgcccctccaagggacgtggcggtcgcggcaacggtcagcctcgtggtaacggccag
tctcgcggcaatggcgcagggcagcgccagggcggaccccgccgcgatcggccgcagcgc
caggcggcagccggcggattcgccggcgatgacctgctgcgcgacgagcgctcgcacgag
cgccgcgaccagcgtgctgccgggcatggaccggcggacggacggccggaaggccaccgc
aatcacaaggcgcagaagcaccatgggcggcccggaccgcagcaggccggccgccgtggg
agcgaacagtcaggcgaacgcaacggcggcggcaatcgaccgcagcgtgccgacggtcgc
ggccatcagcgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (14)   

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