KEGG   Staphylothermus marinus: Smar_0343
Entry
Smar_0343         CDS       T00485                                 
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
  KO
K02031  peptide/nickel transport system ATP-binding protein
Organism
smr  Staphylothermus marinus
Pathway
smr02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:smr00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Smar_0343
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:smr02000]
    Smar_0343
Transporters [BR:smr02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Smar_0343
SSDB
Motif
Pfam: ABC_tran oligo_HPY AAA_21 SMC_N AAA AAA_22 RNA_helicase AAA_5 ATP-synt_ab Herpes_ori_bp NACHT AAA_7
Other DBs
NCBI-ProteinID: ABN69455
UniProt: A3DLE5
Position
complement(362994..364013)
AA seq 339 aa
MSIKCDPIIEVRDLYVNFYTYAGIVKAIDSVSFKICRGETYCLVGETGCGKSVTAKSLTG
LIRSPGKIEKGEVLYYPEPGAKPINLLQLSENDLRKIRGSEISYIFQDPSASLDPLYTIG
YQVSETMYEHDRIRSIKEGIRKAVEILRKVLMPDAETRVKNYPHELSGGMKQRAVIGISL
SNNPKLVIADEPTTALDATVQDQIMDLLKKLKERENLTVLLITHNMGLVADMCDRVAVMY
AGRIVEEADIYELFKNPYHPYTKALLRAVPNPLTKMEKLESIPGTVPNLINPPPGCRFHP
RCPFKMDICERERPPDIWVGPGHRIACWLYGEKKSSEGA
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgagtataaaatgtgacccaattattgaggttagagacctatacgttaacttctacaca
tatgctggaatagttaaggcaattgatagtgtaagctttaagatatgccgtggagaaaca
tactgcctagtaggagaaactggatgtggtaaatcagtaacagctaaatcactcacagga
ctcatacgctcccctggcaaaatagaaaaaggagaagtcctatactatccagaaccagga
gcaaaacctataaacttgttacagctcagcgaaaacgatctaagaaagattcgtggctcg
gaaatatcatatattttccaagatccttcagcaagtcttgacccgctatatactattggc
taccaagtatcagaaacaatgtatgaacatgataggataagatcgataaaggagggaata
cgtaaagctgtagagatactgaggaaagtattaatgcctgatgcagaaactagagtaaag
aattatccacacgaattaagcggtggtatgaagcagagagctgttataggaatatctctc
agcaacaaccctaaactagtaatagcagatgagcctacaacagcgctagatgcaacggtt
caagaccaaataatggatctcttaaagaaattaaaggagagagaaaacctaactgttcta
cttatcactcataatatggggcttgtagcggatatgtgtgatcgtgttgctgtaatgtat
gctggtagaatagttgaggaagcagatatttatgaattatttaagaacccgtatcaccca
tatacaaaggcactacttagagcagtaccaaacccattaactaagatggaaaagctagaa
tcaatacctggaacagttccaaacctaataaatccgcctcctggttgtcgttttcatcca
agatgcccattcaaaatggacatatgtgagagggagaggcctccagatatatgggtaggg
cctggtcatagaatagcttgttggttatatggtgagaaaaagagttccgaaggtgcttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (12)   
   Pfam (12)   
All databases (25)   

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