KEGG   Stenotrophomonas maltophilia R551-3: Smal_1456
Entry
Smal_1456         CDS       T00733                                 
Name
(GenBank) tRNA pseudouridine synthase D TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
smt  Stenotrophomonas maltophilia R551-3
Brite
KEGG Orthology (KO) [BR:smt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:smt03016]
    Smal_1456
Enzymes [BR:smt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     Smal_1456
Transfer RNA biogenesis [BR:smt03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    Smal_1456
 Prokaryotic type
    Smal_1456
SSDB
Motif
Pfam: TruD Seadorna_VP6
Other DBs
NCBI-ProteinID: ACF51161
UniProt: B4SR90
Position
1641278..1642309
AA seq 343 aa
MIPLPLAFGAPLLSARIRTTPEDFQVDELPAFEATGEGEHLLLHIRKRGANTVHVAKLLA
TWAGLPEMAVSYAGMKDRHAVTTQRFSVHLPKRVAPDLATLASDEIEVIESTWHNRKLQR
GALAGNRFKLVLRDVQGDAAAISERLQQIAERGLPNWFGEQRFGRDGGNVPAALAMFGGR
RMRKDQRSLLLSAARSALFNRVLAARVEQGNWDQPLDGEVWMLDGSRSVFGPEPYTDVLA
ERLARFDIHPSAPLWGEGELRSTEAAHALELAALDDDESRALRAGLEDARLKQERRALRL
RPALLQHQWLADDVLELSFALPPGCYATAVLHELGPVEDASQA
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgattccgctgccgctcgcgttcggcgcgccgctgctgagcgcacgcatccgcaccacg
ccggaagatttccaggttgacgaactgccggccttcgaggccaccggcgaaggcgagcac
ctgctgctgcatatccgcaagcgtggagccaacaccgtgcacgtggccaagttgctggcc
acatgggccggcctaccggaaatggcggtgagctatgccggcatgaaggatcggcacgcg
gtcaccacccagcgcttcagcgtgcacctgcccaagcgcgtggcacctgacctggccacg
ctggccagtgatgaaatcgaagtgatcgaatccacctggcacaaccgcaagctgcagcgt
ggcgcgctggccggcaaccgcttcaagctggtgctgcgcgacgtgcagggtgatgccgcg
gcgatcagcgagcgcctgcagcagatcgcagagcggggcctgccgaactggttcggcgag
cagcgttttggccgcgacggtggcaacgtgccggcggcgctggcgatgttcggtggccgt
cgcatgcgcaaggaccagcgttcactgctgctgtcggcggcccgctcggcgctgttcaac
cgcgtgctggccgcgcgcgtggagcagggcaactgggaccagccgctggatggcgaagtg
tggatgctcgatggcagccgcagcgtgttcggccccgagccgtataccgacgtactggcc
gagcgcctggcgcgcttcgacatccaccccagcgcaccgctgtggggcgaaggtgaactg
cgcagcaccgaagcggcacacgcgctggagctggcggcgctggatgacgacgaatccagg
gcgctgcgtgcaggtctggaagacgcgcgcctgaagcaggagcgccgcgcactgcgcctg
cgtccagcgttgctgcagcaccagtggctggccgacgacgtgctggaactatcgttcgcg
ctgccgccgggctgctacgccaccgccgtgctgcacgaactcggccccgtcgaagacgcc
tcgcaggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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