KEGG   Serratia marcescens WW4: SMWW4_v1c11730
Entry
SMWW4_v1c11730    CDS       T02448                                 
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
  KO
K02340  DNA polymerase III subunit delta [EC:2.7.7.7]
Organism
smw  Serratia marcescens WW4
Pathway
smw03030  DNA replication
smw03430  Mismatch repair
smw03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:smw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SMWW4_v1c11730 (holA)
   03430 Mismatch repair
    SMWW4_v1c11730 (holA)
   03440 Homologous recombination
    SMWW4_v1c11730 (holA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smw03032]
    SMWW4_v1c11730 (holA)
   03400 DNA repair and recombination proteins [BR:smw03400]
    SMWW4_v1c11730 (holA)
Enzymes [BR:smw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     SMWW4_v1c11730 (holA)
DNA replication proteins [BR:smw03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     SMWW4_v1c11730 (holA)
DNA repair and recombination proteins [BR:smw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     SMWW4_v1c11730 (holA)
SSDB
Motif
Pfam: DNA_pol3_delt_C DNA_pol3_delta DNA_pol3_delta_C
Other DBs
NCBI-ProteinID: AGE16977
Position
complement(1297904..1298938)
AA seq 344 aa
MIRIYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLLRQAAQQQQFSEHYSISLDAHTD
WDAIFGICQAMSLFASRQTLLLIFPENGPTAPIGEQLSKLATLLHEDILLILRGPRLTKA
QENSAWFKALSPHGALVSCQTPEQAQLPRWVAARAKAMKLELDDAANQLLCYCYEGNLLA
LSQALERLSLLHPDGKLTLPRVEQAVNDAAHFTPFHWLDALLAGKSKRAWHILQQLQQED
VEPVILLRTLQRELLLLLTLQRRMASAPLRSLFDQHKVWQNRRPLVTQALQRLSGPQLQQ
AVQLLTQIELTLKQDYGQSVWPELETLSMLLCGKPLATSFSDAH
NT seq 1035 nt   +upstreamnt  +downstreamnt
atgatccgcatttatccggaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttattgagcggcaatgaaccgctgctgctgcaggaaagccaggatttactccggcag
gccgcgcaacagcagcagttcagcgagcactacagcatttccctcgacgcccatactgac
tgggacgccatcttcggcatctgccaggcgatgagcctgttcgccagccgccagacgctg
ctgctgatcttcccggaaaacggcccgacggcgccgatcggtgagcagttgagcaaactc
gccacgctgctgcacgaggatattttgctgatcctgcgcggcccgcgcctcaccaaagcg
caggaaaacagcgcctggttcaaggcgctcagcccacacggcgctctcgtcagttgccag
acgcctgaacaggcgcagctgccgcgctgggtcgccgcgcgcgccaaagcgatgaagctg
gagttggacgacgcggccaatcagctgctgtgttactgctacgaaggcaacctgctggcg
ctgtcgcaggcgctggagcggctgtcgctgctgcacccggacggcaagctcacgctgccg
cgcgtcgagcaggcggtgaacgacgccgcccacttcacgccgttccactggctggatgcc
ctgctggccggcaagagcaagcgcgcctggcatattttgcagcagttgcagcaagaggac
gtggagccggtgatcctgctgcgcaccctgcagcgcgaactgctgctgctgctgacgctg
cagcgccgcatggcgtctgcgccgctgcgctcgctgttcgatcagcacaaggtctggcag
aaccgccgcccgttggtgacccaggcgttgcaacgcctgtccggcccccagctgcagcag
gcggtacagctgctgacgcaaatcgagctgaccctcaagcaggactatggccagtcggtc
tggccggaactggaaaccctgtcgatgctgctgtgcggcaaacccctggccacgagtttt
agcgatgcccactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (15)   

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