KEGG   Stenotrophomonas maltophilia D457: SMD_3892
Entry
SMD_3892          CDS       T02061                                 
Symbol
nudH
Name
(GenBank) Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase
  KO
K08311  putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
smz  Stenotrophomonas maltophilia D457
Pathway
smz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:smz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SMD_3892 (nudH)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:smz03019]
    SMD_3892 (nudH)
Messenger RNA biogenesis [BR:smz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     SMD_3892 (nudH)
SSDB
Motif
Pfam: NUDIX NUDIX_4
Other DBs
NCBI-ProteinID: CCH14402
Position
complement(4366002..4366622)
AA seq 206 aa
MIDPDGYRPNVGIVLMRQDGQVFWARRVRRDGWQFPQGGMNTDETPVEAMYRELQEETGL
LPEHVEVLGATPGWLRYKLPARAIRRNERQVCIGQKQVWFLLRLTGDESHVTLDHTDSPE
FDHWRWVDFWYPVEHVVMFKRGVYARALRHLAPLARGVAGQGVTAMPKSAAEAWMPGHTA
GHDRPRKRPRTRGYWPKKVTGDGPAS
NT seq 621 nt   +upstreamnt  +downstreamnt
gtgatcgatccggacggctatcgaccgaacgtcggcatcgtgctgatgcggcaggacggc
caggtgttctgggcacgacgcgtgcgccgggatggctggcagttcccgcagggtggcatg
aacaccgacgagacgcctgtcgaggccatgtatcgtgaactgcaggaagagaccggcctg
ctgcctgagcatgtggaagtgctcggggccacgcccggctggctgcgctacaagctgccg
gcgcgggccatccgccgcaacgagcggcaggtctgcatcggccagaaacaggtctggttc
ctgctgcgcctgaccggcgacgaatcccacgtgacgctggaccacaccgactcgcccgag
ttcgaccactggcgctgggtcgacttctggtacccggtagagcacgtggtgatgttcaaa
cgcggcgtctatgcgcgtgccctgcgacacctggcgccactggcgcgtggcgtggccggg
cagggcgtcaccgccatgcccaagagcgccgccgaggcctggatgccgggccacaccgcc
gggcacgaccgcccgcgcaagcgcccgcggacccgagggtactggccgaagaaggtcacg
ggcgacggcccagccagctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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