KEGG   Sphingomonas sp. NIC1: A7E77_10880
Entry
A7E77_10880       CDS       T04479                                 
Name
(GenBank) glutamate dehydrogenase
  KO
K15371  glutamate dehydrogenase [EC:1.4.1.2]
Organism
snj  Sphingomonas sp. NIC1
Pathway
snj00220  Arginine biosynthesis
snj00250  Alanine, aspartate and glutamate metabolism
snj00430  Taurine and hypotaurine metabolism
snj00910  Nitrogen metabolism
snj01100  Metabolic pathways
snj01120  Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:snj00001]
 09100 Metabolism
  09102 Energy metabolism
   00910 Nitrogen metabolism
    A7E77_10880
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    A7E77_10880
   00220 Arginine biosynthesis
    A7E77_10880
  09106 Metabolism of other amino acids
   00430 Taurine and hypotaurine metabolism
    A7E77_10880
Enzymes [BR:snj01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.1  With NAD+ or NADP+ as acceptor
    1.4.1.2  glutamate dehydrogenase
     A7E77_10880
SSDB
Motif
Pfam: Bac_GDH_CD GDH_C GDH_ACT1 GDH_HM3 GDH_ACT3 GDH_HM2 GDH_ACT2 GDH_HM1 ELFV_dehydrog
Other DBs
NCBI-ProteinID: ANC87358
Position
complement(2274104..2278708)
AA seq 1534 aa
MADQNQSMAEALAARLTKGALPGELTGFGDAERAAAAAFVAETAARREPGKPAIRLEPIA
SDDVRRRMRLAIVNDDMPFLVDSIAAAIGAQDLDIDRLIHPVVRVTRDASGALTDIGGAG
TPESMIYIELERADARDRRGLVEDLTAVLADVRAAVTDWPALQRAMARDEAALPQGEGAA
LLQWFLDGQFTLLGHQIWRRDGSAGEALGIVRHPHETPVLAEANRALAIRWFEEGNDAPL
LLKSSLISTVHRAVPLDLVLVPVMEAGEVVGLSIHAGLWTSAALSAKPRDIPVLRARLSV
LEAKFGFDPKGHTGKALTHALTALPHDLVVAFAPDALEEVVLTAMSLADRPRPALVLVKS
ALGRHLFAFAWLPRDDLTTARRVAIGQMLADASNGNVLNWSISLDDGVVALLRYTIDLRG
SGRMPETEPLAERLRKMVRGWMSDVEAALAEQVPAQRAARLALRWANAFPANYRNVSSPA
EAAQDILRVAGLESADDRSVRIFPVVAGEDRQLKIYKLHGALALSDAVPVLENFGFRVIG
ELPTRLQDEADTFVHDFVVETDATDDANDAAVLEGAIAAVLEGAAENDAFNRLIIDVGLS
PQSVVLLRAWFRYLRQAGLPYGLTTVVDALRRAPKLTKALIARFAAAHDPKGSGDLTASD
EAIARGLDAVSAIDDDRILRAYRDLIGACLRTNAFAPAANEALAFKLDSHLIPGLPAPVP
WREIWVYSPRVEGIHLRAGPVARGGLRWSDRRDDFRTEILGLMKAQRVKNAVIVPTGAKG
GFYPKQLPSPAVDRDAWLAEGTESYRIFIRSLLSITDNIVDGRVVHPADVAVLDGEDPYF
VVAADKGTATFSDVANALALERDFWLGDAFASGGSVGYDHKAMGITAKGAWVSVQRHFAE
RGVDVQTQPITVVGCGDMSGDVFGNGMLLSKALKIVAAFDHRHIFIDPNPDPAASWEERA
RMFALPRSSWADYDAGLISEGGGVWARSEKVIPLSPQAQAALGITATQLDPASLISAILK
APADLLWFGGIGTYVKAARENNAAVGDPANDRLRVDAEQLRVTAIGEGANLGVTQAARIA
FSERGGRINTDFIDNSAGVDCSDNEVNIKIALNREMNEGRLGYEERNALLASMTDDVAHL
VLEDNRLQTLALSIAEADGASAIPSYVRVIEIFEGAGRLDRAVEGLAGNDDLLRRGQEGH
GLTRPELAVLLATAKLSLQDGIEQAPLALAPELAPDLHAAFPPAMQRDFAKAIDEHRLRG
EIVATKLANRIVNRLGVLRPFELAEEEGAAVADIAAMFVVAERVFGLDSLWAEIERADIA
EGARIALFNEVAVATRSHIADLLRANAPGTLPGAVIERLGQGIAALERQTQSLLLEEASA
QSARIAAELEAAGAPAELARRVVRLFDMDGVVGLAALGQRLGIDEIELTRAYTHLGQDLG
LDWAQAAAARIVSGDPWERLLLAGLARDFQQQRLEFLGRTGDGDPRSAVQAWLAANGARV
AQFKALVDRARHAAQPNAAMLAQIAGQARVLLGR
NT seq 4605 nt   +upstreamnt  +downstreamnt
atggccgaccagaaccagagcatggccgaggcgcttgccgcccggctgaccaagggcgcg
ctaccgggggagctgaccggcttcggcgatgccgagcgggccgccgccgcggcgttcgtt
gcggagaccgccgcgcgccgtgagcccgggaaacccgcgatccggctggagccgatcgcg
tcggacgacgtgcgccgccgcatgcgcctcgccatcgtcaacgacgacatgcccttcctg
gtcgattcgatcgccgccgcgatcggcgcgcaggatctcgacatcgaccgcctgatccac
cccgtcgtccgggtaacgcgcgacgcatcgggggcgctgaccgacatcggcggcgccggc
acgcccgaatcgatgatctatatcgaactggagcgagccgatgcgcgtgaccggcgcggc
ctggtcgaggatctgaccgcggtactcgccgacgtgcgcgccgccgtcaccgactggccc
gcgctgcaacgcgcgatggcgcgcgacgaagccgcgctgccgcagggcgagggcgccgcg
ctgctgcaatggttcctcgacggccagttcacgttgctcggccaccagatctggcggcgc
gacggcagcgcgggcgaagcgctcggcatcgtccgccatccgcacgaaacgccggtgctc
gccgaggcgaaccgcgcgctcgcgatccgctggttcgaagagggcaatgacgcgccgctg
ctgctgaaatccagcctgatctcgaccgtccaccgcgccgtgccgctcgacctggtgctg
gtgccggtgatggaagcgggcgaggtcgtcggcctgtcgatccacgccggcctgtggacc
agcgccgcgctcagcgccaagccgcgcgacatccccgtgctgcgggcgcgcctgtcggtg
ctggaggcgaagttcggcttcgatcccaagggccataccggcaaggcgctgacgcatgcg
ctgacagcccttccccacgacctcgtcgtcgccttcgcacccgatgcgctggaagaggtg
gtgctgacggcgatgagcctcgccgaccggccgcggccggcgctggtgctggtgaagtcg
gcgctggggcggcacctgttcgccttcgcctggctgccgcgcgacgacctgaccaccgcg
cgccgcgtcgcgatcggccagatgctggccgacgcctcgaacggcaatgtcctcaactgg
tcgatcagcctcgacgacggcgtcgtcgcgctgctgcgctacacgatcgacctgcgcggg
tcgggccgcatgcccgagaccgaaccgctcgccgagcgcttgcgcaagatggtgcgcggc
tggatgtcggacgtcgaggcggcgctggccgaacaggtgcccgcgcagcgtgcggcgcgg
ctggcgttgcgctgggccaacgccttccccgccaattaccgcaacgtcagcagccccgcc
gaagcggcgcaggacatcctgcgcgtcgcggggctggaaagcgccgacgaccgctcggtg
cgcatcttcccggtcgtcgcgggagaggatcgccagctcaagatctacaagctgcacggc
gcgctcgcgctgtcggacgcggtgccggtgctcgagaatttcggcttccgcgtgatcggc
gaactgccgacgcggttgcaggacgaagcggacaccttcgtccacgatttcgtcgtcgaa
accgatgcgaccgacgatgccaatgacgccgcggtgctggaaggcgcgatcgccgcggtg
ttggaaggcgcagcggaaaacgatgcgttcaaccgcctgatcatcgacgtcggcctctcg
ccgcagtcggtggtgctgctgcgcgcctggttccgttatctgcgtcaggcaggcctgccc
tatggcctgaccaccgtcgtcgacgcgctgcgccgtgcgcccaagctgaccaaggcgctg
attgcgcgcttcgcggccgcgcatgatcccaagggcagcggcgacctgaccgccagcgac
gaagcgatcgcgcgcggcctcgacgcggtgtcggctatcgacgacgaccgtatcctgcgc
gcctatcgcgacctgatcggcgcctgcctgcgcaccaacgccttcgcccccgcggcgaac
gaggcgctggcgttcaagctcgacagccacctgatccccggcctgcccgcccccgtgccg
tggcgcgaaatctgggtctattcgccgcgggtcgagggcatccacctgcgcgccggcccg
gtcgcacgcggcggcctgcgctggtcggaccggcgcgacgacttccgcacggaaatcctc
gggctgatgaaggcgcagcgcgtcaagaatgccgtgatcgtgccgaccggcgccaagggc
ggcttctaccccaagcagctcccctcccccgcggtcgaccgcgacgcgtggctggcggaa
ggcaccgaaagctaccggatcttcatccgttcgctgctgtcgatcaccgacaatatcgtc
gacggccgcgtcgtgcatccggcggacgtcgcggtgctcgatggcgaggacccctatttc
gtcgtcgccgccgacaagggcaccgcgacgttcagcgacgtcgccaatgcgctggcgctg
gagcgcgacttctggctgggcgacgccttcgcgtcgggcggcagcgtcggctacgaccac
aaggcgatgggcatcaccgccaaaggcgcgtgggtgtcggtgcagcgccacttcgccgag
cgcggcgtcgacgtgcagacccagccgatcaccgtcgtcggctgcggcgacatgtcgggc
gacgtcttcggcaacggcatgctgctcagcaaggcgctgaagatcgtcgcggcgttcgat
caccgccacatcttcatcgaccccaatcccgatcccgcggcgagctgggaagagcgcgcg
cgcatgttcgctctgccccgctccagctgggcggattacgacgccggcctcatcagcgaa
ggcggcggcgtgtgggcgcgcagcgagaaggtcattccgctgtcgccgcaggcacaggct
gcgctcggcatcaccgcgacgcagctcgaccccgcatcgctcatctccgcgatcttgaag
gcgcctgcggacctgctgtggttcggcggcatcggcacctatgtgaaggcggcgcgcgag
aacaatgctgcggtcggcgatcccgccaacgaccgtctgcgcgtcgatgccgaacaattg
cgcgtcaccgcgatcggcgagggcgcgaacctgggcgtcacccaggcagcgcgcatcgcc
ttctcggaacgcggcggccggatcaacaccgacttcatcgacaattcggcgggcgtcgat
tgttcggacaacgaggtgaacatcaagatcgcgctcaatcgcgagatgaacgaaggccgc
ctcggctacgaggagcgcaacgcgctgctcgccagcatgaccgacgacgtcgcgcatctg
gtgctggaggacaaccgcctccagacgctcgcgctgtcgatcgccgaggccgatggcgcg
agcgccatcccgagctacgtccgcgtcatcgaaatcttcgaaggcgccgggcgactggac
cgtgcggtcgaggggctggccggcaatgacgacctgctgcgccgcgggcaggagggccat
ggcctcacccgccccgaactcgccgtgctgctcgccaccgccaagctgtcgctgcaggac
gggatcgagcaggcaccgctggcgctcgcccccgaactcgcgccggacctgcatgccgcc
ttcccgccggcaatgcagcgcgacttcgccaaggcgatcgacgagcatcgcctgcgtggc
gagatcgtcgcgaccaagctcgccaaccgcatcgtcaatcgcctcggcgtgctgcgcccg
ttcgagctggccgaagaggaaggcgccgcggtcgccgacatcgccgcgatgttcgtggtg
gcggaacgtgtcttcggcctcgacagcctgtgggcggagatcgaacgcgccgacatcgcc
gagggcgcgcgcatcgcgctgttcaacgaggtggcggtggcgacgcggtcgcacatcgcc
gacctgctgcgcgccaatgcgcccggcacgctgccgggtgcggtgatcgaacggctgggc
cagggcatcgccgcgctggaacgccagacgcagtcgctactgctcgaagaagcgagcgcg
cagagcgcccgcatcgcggccgagctggaagccgcgggtgcgcccgccgagttggcacgt
cgcgtcgtccgcctgttcgacatggacggcgtcgtcggcctcgccgcgctgggccagcgc
ctcggaatcgacgagatcgagctgacgcgggcctatacccacctcggccaggatctcggc
ctcgactgggcacaggcagcggcggcgcgcatcgtctcaggcgatccgtgggaacgcctg
ctgctcgccggcctggcgcgcgatttccagcagcagcggctggagttcctcggccgcacc
ggtgacggcgatccgcgcagcgcggtgcaggcatggctggccgcgaacggcgcgcgcgtc
gcgcagttcaaggcgctggtcgaccgcgcccgccatgcggcgcagcccaatgcggccatg
ctcgcgcagatcgccggccaggcccgcgtgctactgggtcggtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (6)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (39)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (66)   

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