KEGG   Streptococcus pneumoniae AP200 (serotype 11A): SPAP_1970
Entry
SPAP_1970         CDS       T01309                                 
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit/160 kD subunit
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
snp  Streptococcus pneumoniae AP200 (serotype 11A)
Pathway
snp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:snp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    SPAP_1970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snp03021]
    SPAP_1970
   03400 DNA repair and recombination proteins [BR:snp03400]
    SPAP_1970
Enzymes [BR:snp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     SPAP_1970
Transcription machinery [BR:snp03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     SPAP_1970
DNA repair and recombination proteins [BR:snp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      SPAP_1970
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Dehydratase_LU
Other DBs
NCBI-ProteinID: ADM85533
Position
complement(1837708..1841385)
AA seq 1225 aa
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYRGIVCDRCGVEVTRTKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGYGSFVAKMGAEAIQDLL
KQVDLEKEIAELKEELKTATGQKRVKAIRRLDVLDAFYKSGNKPEWMILNILPVIPPDLR
PMLQLDGGRFASSDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDRDEAVMAYRNGYVHLHSRVGI
ATDSLNKPWTEEQRHKVLLTTVGKILFNDIMPEGLPYLQEPNNANLTEGVPAKYFLPLGG
DIKEAISNLELNPPFKKKNLGNIIAEIFKRFRTTETSALLDRMKNLGYHHSTLAGLTVGI
ADIPVVDDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLIANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRSIAEGKEMIESLE
ERLNGRYTKKTVKHPETGAVIIGPNELITEDKAREIVNAGVEEVTIRSVFTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRVQEI
FEARNPKGEAVITEVKGQVTAIEEDASTRTKKVFVKGETGEGEYVVPFTARMRVEVGGQV
ARGAALTEGSIQPKRLLAVRDVLSVETYLLGEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDINDFTDANKDVLIAGGVPATGRPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPHAVNEEEYLNPPV
EEEGNEETTEVVVDTAVETVEETVE
NT seq 3678 nt   +upstreamnt  +downstreamnt
gtggttgatgtaaatcgttttaaaagtatgcaaatcaccctagcttctccaagtaaagtc
cgttcatggtcttatggagaagtcaaaaaacctgaaacaatcaattatcgtaccttgaaa
ccagaacgtgaaggactctttgatgaagtgatctttggtcctacaaaagactgggaatgt
gcttgtggtaagtacaaacgcattcgttacagaggaattgtttgtgaccgctgtggggtt
gaagtaacgcgtacgaaagttcgtcgtgagcgtatgggacatatcgaattgaaagctcct
gtatctcacatctggtacttcaaggggattccaagccgtatgggcttgacccttgatatg
agccctcgtgccctcgaggaagttatctactttgcggcttatgtggtgattgatcctaag
gatacaccacttgagcacaagtctatcatgacagagcgcgaataccgagagcgcttgcgt
gaatatggttatggttcatttgttgccaagatgggtgcggaagccatccaagaccttttg
aagcaagtagatcttgaaaaagaaattgctgaactcaaagaagaattgaaaacagctact
ggacaaaaacgtgtcaaagccatccgtcgtttggatgttttggatgccttttacaagtct
ggaaacaaacctgaatggatgattcttaacatccttccggttatcccaccagatcttcgt
ccaatgttgcagttggatggtggccgttttgcctcatctgacttgaatgacctttaccgc
cgtgttatcaaccgtaacaaccgtttggctcgtttgcttgagttaaatgcaccaggtatc
atcgttcaaaatgagaagcgtatgcttcaagaagcagttgacgctttgattgacaatggt
cgtcgtggtcgtccaatcacaggaccaggtagccgtccattgaaatcattgagccacatg
cttaaaggtaaacagggacgcttccgtcaaaacttgctcggtaaacgtgttgacttctca
ggacgttccgttatcgccgttggtccaactcttaagatgtaccaatgtggtgtgccgcgt
gaaatggcgattgaactctttaaaccatttgtcatgcgtgaaatcgttgcccgtgatatc
gtgcaaaacgtcaaagcagctaaacgcttggtggaacgcggagatgagcgtatctgggat
atccttgaagaagtgattaaagaacacccagtgcttttgaaccgcgcaccgacccttcac
cgtttgggtatccaagccttcgagccagtcttgattgatggtaaggctcttcgcttgcac
ccacttgtctgtgaagcctacaatgctgactttgacggggaccaaatggccatccacgta
ccactttcagaagaagcacaagcagaagctcgtatcctcatgctagctgctgagcacatc
ttgaacccgaaagatgggaaaccggtagttactccatctcaggacatggttttgggtaac
tactacttgaccatggaagaagctggtcgcgaaggtgaaggaatggtcttcaaagaccgt
gacgaagcggttatggcttaccgcaatggttatgttcacctccactcacgtgttggtatc
gcaacagacagcctcaacaagccttggacagaagagcaaagacataaggtcttgcttaca
acagttggtaaaattctcttcaacgatatcatgccagaggggctaccatacttgcaagaa
ccaaacaatgccaacttgacagaaggtgttccagctaaatacttcttgccacttggtgga
gatatcaaggaagctatcagcaatcttgagctcaaccctccattcaagaagaaaaacctt
ggaaatatcatcgctgaaatcttcaaacgtttccgtacgacagaaacttctgccctactt
gaccgcatgaagaacctcggttaccaccactcaactcttgcaggattgacagtgggtatt
gccgatatcccagtcgttgatgacaaggctgaaatcattgaagaatcacacaaacgtgtc
gaacaaatcaccaaacaattccgtcgtggtatgatcacagacgacgagcgttacaatgct
gttacagctgaatggcgtgctgcccgtgaaaaacttgagaaacgcttgattgctaaccaa
gatcctaagaacccaatcgttatgatgatggactctggagcccgtggtaacatctcaaac
ttctcacagcttgccggtatgcgtggtctgatggctgctccgaatggacgtatcatggaa
ttgccaatcctttcaaacttccgcgaaggtttgtcagtattggaaatgttcttctcaact
cacggtgctcgtaaaggtatgaccgatacggcccttaagacagccgactcaggttacttg
actcgtcgtttggtcgacgttgcccaagacgttatcatccgtgaggacgactgtggaact
gaccgtggtctcttgatccgttctatcgcagaaggaaaagagatgatcgagtctctcgaa
gagcgtctcaacggtcgttacactaagaaaactgttaaacatccagaaactggtgcagtg
attattggtccaaatgaattgattacagaagacaaggcgcgtgaaattgtcaatgctggt
gtggaagaagtgactatccgttctgtatttacatgtaacactcgtcacggtgtctgccgt
cactgttacggtatcaacttggcgactggtgatgcggttgaagttggtgaagcagttggt
acaatcgctgcccaatctatcggggaacctggtacacagcttacaatgcgtaccttccac
acaggtggggttgcctcaaataccgatatcactcagggtcttcctcgtgtccaagaaatc
tttgaagcccgcaatcctaaaggggaagcggttatcacagaggttaaaggacaagttact
gctatcgaagaagatgcatcaactcgtaccaagaaagtctttgttaagggtgaaactggc
gaaggtgaatatgtcgttccatttacagctcgtatgcgtgtcgaagttgggggccaagta
gcgcgtggtgctgctctgacagaaggttctatccaaccaaaacgtctccttgcagttcgt
gatgtcttgtcagttgaaacgtaccttctcggtgaagtacaaaaagtttaccgtagccaa
ggggtagaaatcggtgacaaacacatcgaggtaatggttcgtcaaatgatccgtaaagtc
cgtgtcatggatccaggtgatacagatcttctcatgggtaccctcatggatatcaatgac
tttacagatgccaacaaagatgtccttatcgcaggtggagttccagcgacaggtcgccca
gtccttatgggaattaccaaagcctcacttgaaacaaacagtttcttgtcagcggcttcc
ttccaggaaacaactcgtgtccttactgacgcagctatccgtggtaagaaagaccatctc
cttggacttaaagaaaatgttatcatcggtaagatcatcccagctggtactggtatggcc
cgttaccgtaaccttgaaccacatgctgtcaacgaagaagaataccttaatcctccagta
gaggaagaaggaaatgaagaaacaacagaagtagttgtggatactgccgttgaaactgtg
gaagaaacagtagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system