KEGG   Sneathia vaginalis: VC03_06295
Entry
VC03_06295        CDS       T03854                                 
Name
(GenBank) hypothetical protein
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
sns  Sneathia vaginalis
Pathway
sns03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sns00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    VC03_06295
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sns03400]
    VC03_06295
Enzymes [BR:sns01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VC03_06295
DNA repair and recombination proteins [BR:sns03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     VC03_06295
SSDB
Motif
Pfam: DEAD ResIII Helicase_C PriA_3primeBD PriA_C AAA_30 SLFN-g3_helicase AAA_19 DUF87 T2SSE PriA_CRR PIF1 Viral_helicase1 NADH-UOR_E Flavi_DEAD TrwB_AAD_bind zinc-ribbons_6
Other DBs
NCBI-ProteinID: AKC96073
UniProt: A0A0E3UV94
Position
complement(1293120..1295039)
AA seq 639 aa
MYYNIQLKKMNMLFTYQSDEEIKLGTYCVVDYNNKKMEGIVVEKVNVLKKEFSIKNIEKV
LDKRLDEKLFSLMQFIHNYYIEPYGNLLSIIEKPEKKEYKDIKENNTKIEEVHLSDEQQK
VYLDIVNSSKTVHLINGVTGSGKTQIYIKLIQKALKEDGSAILLVPEITLTSQLKKNLEK
ALGQNIALWHSKLTKNAKIKYFNLIEEKKIRVILGARSAIFSNLSNLKYIIIDEEHESTY
KQDEAPRYHVKNVAIKRALLENAKVVLGSATPSFETMYQVKNKDIEEHILKNRYNGAKLP
EYIVKDISEEKDFLTDELIERINEKLKNKEQVILLLNRKAYSIILKCRDCKKNMECDICT
FSLTYYKNNILKCNQCGKTYKMITRCKYCGSEKLEKKGTGTEKLEERLKEIFDEDRILRM
DADSMTSKTKIDKAYQDFLNNKYDILIGTQILAKGFHFPNVTLVGILNADQMLSYPDYRA
YERSYQLIAQASGRSGREGKKGQVFIQTYDKDSILINSIITNDYNLIYEEQMKLREKLGY
PPYKKHIKILFTDTNENRLNKIASSCYQYILNKLGTYAKIYPVAKCMVYKASKRYRVNIN
ILYDRKNDKVIKKIIRKLIENRNRIVTRILVDVDPNNML
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgtactataatattcaattaaaaaaaatgaatatgctattcacataccaaagtgatgaa
gaaataaagcttggaacatactgtgtagttgactataataacaaaaaaatggaaggtata
gtagttgagaaagtaaatgtattaaaaaaagagtttagcataaagaacatagaaaaagtg
ctagataaaagactagatgaaaagcttttttcgctaatgcaatttatacacaactactat
atcgaaccatatggtaatttacttagtataatagaaaaaccagaaaaaaaagaatataaa
gatataaaagagaataacacaaaaatagaagaagtacatttaagtgatgaacaacaaaaa
gtatatttggatatagttaattctagtaagacagtacatctaataaatggtgtaactggt
agtggtaagacacaaatatatattaagttaatacaaaaagctttaaaagaagatggtagt
gccatactattagttccagaaataacacttacaagtcaattaaagaaaaatttggaaaag
gcacttggtcaaaatattgccttatggcatagtaaattaactaagaacgcaaagataaag
tactttaatctcatagaagaaaagaaaataagggtaattttaggagctagatctgcaata
tttagtaatctttctaatttaaagtatataataatagatgaagagcatgaaagtacatac
aaacaagatgaagcaccaagatatcatgtaaaaaatgttgcaataaaaagggcattactt
gaaaatgcaaaagtagtattaggttctgcaactccttcatttgaaactatgtatcaggtg
aaaaataaggacatagaagagcatatattaaaaaatagatataatggagcaaaattacct
gagtatatagtaaaagatattagcgaggaaaaagattttttaactgatgaattaatagaa
agaattaatgaaaaattaaaaaataaagaacaggtaatactattacttaatagaaaggca
tattcaattatcttaaagtgtagagactgtaaaaaaaatatggaatgtgatatatgtact
tttagtctaacgtactataaaaacaacattctaaagtgcaatcaatgtggtaagacatat
aagatgattacaagatgtaagtactgtggtagtgagaagttagaaaaaaaaggtacaggt
acagaaaagttagaggaaagattaaaagaaatttttgatgaggatagaatattaagaatg
gatgcagattctatgacaagtaaaacaaaaatagataaagcttaccaagattttttgaat
aataagtatgatattctaataggaactcaaatattagcaaaaggatttcactttccaaat
gttactttagttggtatactaaatgctgatcaaatgttatcgtatccagattatagggca
tatgaaagaagttatcagttaatagcacaagcttcaggtagatcaggtagagaagggaaa
aaaggacaagttttcattcaaacatatgataaagattcaattctaataaactctataatc
accaatgactataacctaatatatgaagaacaaatgaagctaagagaaaaattgggttat
ccaccatataagaaacacataaaaatattatttaccgatacaaatgaaaatagacttaat
aaaatagctagtagttgttatcaatatattttgaataaactagggacttatgctaaaata
tatcctgtggcaaagtgtatggtatataaggcaagtaaaagatatagagttaatataaac
atactatatgacagaaaaaatgataaggtaataaagaaaattattagaaaattaatagaa
aatagaaataggatagttacaaggatattagtagatgtagatccaaataatatgctatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (17)   
   Pfam (17)   
All databases (47)   

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