KEGG   Sodalis praecaptivus: Sant_2975
Entry
Sant_2975         CDS       T03004                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
sod  Sodalis praecaptivus
Pathway
sod03030  DNA replication
sod03430  Mismatch repair
sod03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sant_2975 (dnaX)
   03430 Mismatch repair
    Sant_2975 (dnaX)
   03440 Homologous recombination
    Sant_2975 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sod03032]
    Sant_2975 (dnaX)
   03400 DNA repair and recombination proteins [BR:sod03400]
    Sant_2975 (dnaX)
Enzymes [BR:sod01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sant_2975 (dnaX)
DNA replication proteins [BR:sod03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sant_2975 (dnaX)
DNA repair and recombination proteins [BR:sod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sant_2975 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_tau_5 DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_4 AAA AAA_22 RuvB_N AAA_5 AAA_16 AAA_14 AAA_18 AAA_30 ResIII nSTAND3 AAA_24 TsaE AAA_2 DNA_pol3_delta AAA_assoc_2 AAA_19 VapE-like_dom SKI Mg_chelatase PIF1
Other DBs
NCBI-ProteinID: AHF77981
UniProt: W0HVW9
Position
complement(3403825..3406239)
AA seq 804 aa
MSYQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLLSGTRGVGKTTIARLLAK
GLNCETGITATPCGQCDNCREIEQGRFVDLIEIDAASRTKVEDTRDLLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKALDV
EQIRGQLSTVLQQEHIAAAPRALQLLARAADGSMRDALSLADQAIAMGQGEVSAEAVSLM
LGTLNTEQPLALIEALADADGGAMMAQLAQCAARGMDWQALLLEMLSLLHRLAMGQLLPD
QLNDEEDPGIVPRLRELARRLPPADLQLYYQTLLIGRKELPFAPDPRMGVEMTLLRALAF
HPAAVEAAVIPANAEKKTAEFSPGAGQGGAAAGAAVASEAASADRVTSRAGVNVSPLAKG
RPGAAPDIAPLAASERVPSPHGGQGRLSASDKAVGAQGGDGSDSPTRSAHAGHVAGQAAP
GHKPAAGVSAPAPALTGGQTPSLPGGGAAATRQATAVDSVDESLMEAYAASGFDDDEAQA
EWQPEAVMPENAEPPAPPPGGDSPLPDATAQLLQARTALLRRQESQKTKKAEPAPARQKA
AVSALERLATVGERAQQRQPAAGREDSVKTPRPEAYRWRASQQPEAEPAPVTTPKALRTA
LEHEKTPELALSLAEEALERDPWAAQVHRLAVPKLVQQLALNAWKEDLAPGKVCLHLRAS
QRHLNSATAQNALRDALSADLGAPVELTVTEDDNPAMKTPLEWRQAIYEEKLMRAREAMM
NDSHIQMLRRFFDAELDEDSIRPV
NT seq 2415 nt   +upstreamnt  +downstreamnt
atgagctatcaggtgcttgcccgtaagtggcgtccgcaaacatttgccgatgtagtaggt
caggagcatgtcctgacggcgctggcgaacggcctatcattgggcaggatccatcatgcc
tatttgttatccggcacccgcggcgtgggtaaaaccaccatcgcccgtcttctggcgaaa
gggctgaattgcgaaaccggtatcaccgccaccccctgtggccagtgcgataattgccgc
gaaatcgagcagggccgcttcgtcgatctgattgaaatcgacgccgcctcgcggaccaaa
gttgaggatacccgcgatctgctggataacgtccagtacgcgccggcgcgcggccgcttc
aaggtgtatctcatcgatgaagtgcatatgctgtcccgccatagcttcaacgcgctgtta
aaaacgctggaggagccgccggcgcacgtcaaatttttactggccaccaccgatccgcaa
aaattaccggtgaccattctttcccgctgtttacaatttcatttaaaagcgctcgacgtc
gagcaaatccgcggtcagctatcgacggtgttgcagcaggagcatatcgccgccgcgccg
cgcgcgctgcaactgctggctcgcgccgccgacggcagcatgcgtgacgccctgagcctg
gccgatcaggctatcgccatggggcagggggaggtcagcgctgaggcggtaagcctcatg
ctcggcacgttgaacaccgagcagccgctggcgcttatcgaagcgctggccgacgccgac
ggcggcgcgatgatggcgcagcttgcgcaatgcgccgctcgcggtatggattggcaagct
ctgctcctggaaatgctctctttgctacaccgtctcgcgatggggcagcttttgccggac
caactcaacgatgaggaagaccccggcatcgtgccgcgtttgcgggaattggcccgtcgc
cttcctccggccgatttgcagctgtattaccaaactttgcttatagggcgcaaagagctg
cctttcgcaccggaccccaggatgggggttgaaatgaccctattgcgcgcgctggcgttt
catcctgccgcggtggaagcggcggtgatacccgccaatgcggaaaaaaaaacggctgaa
ttcagccccggcgccggccagggtggagctgccgccggcgcagccgtcgcctcagaggcc
gcgtccgcggatcgcgtgacgtcgcgcgccggcgttaatgtctcccccctcgctaagggc
cggccgggcgcggcaccggacatagcccccctggcggcgtctgagagggtgcccagtccc
catggcgggcaagggcgcctctcggcgtcagacaaggcggtaggtgcccaggggggcgac
gggagcgatagcccaacgcgcagtgcgcatgccggccatgtcgctggacaggcggcaccg
gggcataaaccggccgctggcgtttctgcgccagcaccagcgttgaccggcgggcagacc
ccgtctctaccgggcggcggcgcggccgctacccggcaagccactgcggttgacagtgtg
gatgaaagcctgatggaggcgtatgccgccagcggcttcgatgatgatgaggcgcaggct
gaatggcagccggaggcggtaatgccggaaaatgccgagccgcccgctccgccccccggc
ggcgatagtccattgccggacgcgaccgcgcagctcttgcaggcccgtaccgccttgctg
cgacgtcaggagagccaaaaaacaaaaaaggctgaaccggcgccggcgcgccaaaaagcg
gccgtcagcgcgctggagcggctggccaccgtgggcgaacgcgcccagcagcgtcagcct
gccgccggacgggaagattcggtgaaaacgccgcgaccggaggcttaccgctggcgtgcc
agccagcagccagaagctgagccggcgccggtgaccactccgaaagcgctgcgcacggcg
ctggagcatgaaaaaacgccggaactggccttgtctctggcggaagaagcgctggaacgc
gatccctgggcggcgcaggtgcatcggctggcggtgcccaagctggtgcagcagcttgct
ttgaacgcctggaaagaagatttggcgccgggcaaggtctgtctgcacctgcgcgcctcg
cagcgtcatttgaattcggcgacggcgcaaaacgccctgcgcgacgcgctcagcgccgat
ttgggcgcaccggttgaattaaccgtaacggaagatgataatccggcgatgaaaacgccg
ctggaatggcgccaggcgatttacgaagagaaactgatgcgggcgcgggaagcgatgatg
aacgattcgcacattcaaatgctgcggcgtttttttgacgccgagttggatgaagacagt
atccgacccgtataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (37)   

Download RDF
DBGET integrated database retrieval system