KEGG   Spinacia oleracea (spinach): 110779125
Entry
110779125         CDS       T05137                                 
Name
(RefSeq) uncharacterized protein LOC110779125
  KO
K12586  exosome complex component RRP43
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110779125
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110779125
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     110779125
SSDB
Motif
Pfam: RNase_PH RNase_PH_C Gon7 DUF5392
Other DBs
NCBI-GeneID: 110779125
NCBI-ProteinID: XP_021839347
UniProt: A0A9R0HYK4
Position
3:34126749..34133665
AA seq 302 aa
MGSSNASGDISADMEIDAFRRLFPVQFYERHFVKSLRPDARTLNSARDTSVALGAVSSAN
GSALVKIGCTTMLAAIKMEIMTPSTESPDEGNLAIEFHMPPICSPLVRPGRPADAAPVIS
KQLADTILSAGMINLKELCLVSGKAAWMAYLDICCLDADGALFDAALLSAVAAFSSLRIP
VVSLNDEGRVFISEEMEEGKSKREPVNKEQRKLTLSNIPFSLTCVLHKNYILADPNAEEE
SIIETSVTVVLNSSGQLVSLYKPGGPVLAYTAAIQDCVALTKQRVQELQIILNEAISDME
VD
NT seq 909 nt   +upstreamnt  +downstreamnt
atggggtcgtcaaatgcttccggagatatatcagctgatatggagattgatgctttcagg
cgcttatttcctgtacagttttatgagcggcatttcgtcaagtctttaaggcctgatgca
aggactcttaactccgccagagatacaagtgtggcccttggggctgtttcatctgcaaat
ggttctgcacttgtaaagattggctgtactactatgctagctgcgatcaagatggagatt
atgactccttctacagagtcaccagacgagggtaacctggctattgagtttcacatgcct
cctatatgttctccccttgttaggcctggaagaccagcagatgcggcaccagttatatca
aagcagttagcagacaccattttaagcgctggtatgataaatctgaaggagttatgcttg
gtcagtggaaaagctgcttggatggcctatctggatatatgctgtttggatgctgatggc
gctctttttgatgctgctttactttcagcagttgctgccttttctagtttgcgcatccca
gttgtatccttgaatgatgaaggaagagtgtttatttccgaggagatggaagaagggaag
tcgaagagagaacctgttaataaagagcaaagaaaacttactttaagcaacattccattt
tcacttacttgcgttcttcacaagaactatatattagctgaccccaatgcggaggaagaa
tccattatagagacttcagtgactgtggttttgaattcatctggtcaacttgtttctcta
tacaagcctggtggacccgttctggcctacacagcagccatccaggattgtgttgcatta
acaaagcagagagtacaagaactccagataatcctaaatgaagccatctctgacatggag
gtagattag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (4)   
   RefSeq(nuc) (2)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (19)   

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