KEGG   Spinacia oleracea (spinach): 110783091
Entry
110783091         CDS       T05137                                 
Name
(RefSeq) splicing factor SF3a60 homolog
  KO
K12827  splicing factor 3A subunit 3
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110783091
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:soe03041]
    110783091
Spliceosome [BR:soe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    110783091
 Complex B
    110783091
 Complex C
   U2 SnRNP specific factors
    110783091
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd FAM60A Desulfoferrod_N Laps SAP
Other DBs
NCBI-GeneID: 110783091
NCBI-ProteinID: XP_021843077
UniProt: A0A9R0I5V7
Position
3:5237916..5247477
AA seq 509 aa
MSSTLLEVTRGSHEEVERLERLIVKELQNEGASSKERLFQSHRVRFMIEHIVSTTNKLVE
IYEDKDNARKDEIAALGGQTATGTNVFSAFYDRLKEIREYHRRHQSARVIDAEEEYEQMF
KEDPMLDFSGEEASGRYLDLHQFYNMYINSKFGKPMDYVAYLMVFSQPQKIPRKRKMTRQ
YKEYTINILEYLISFFERTEPLKDLDRIFSKVISDFEEKWAIGEVEGWENEGQENGHVSQ
SDVIDLDYYSTVEELMELGPEKLKEALAALGLKTGGTVQQRAERLFLTKNTPLEKLDRKH
FAKLPCGSNQNGNGDVQFHKQEDIKELALVEAKMKKLCELLEEIIVRTKENIVKKQGMTF
EEIEKEHEEEDEQAESESDEEDQPIYNPLKLPLGWDGKPIPYWLYKLHGLGQEFKCEICG
NHSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIQDAKNLWEKIQKRQGLHKWR
PDLEEEYEDQEGNIYNKKTYADLQRQGLI
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtcgtcgacgcttctcgaagtaactcgaggctctcacgaagaagtagagagattggag
cgcctcattgtgaaggagcttcagaatgaaggtgcttcttcaaaagaacgtctgtttcag
agtcatcgtgttcgcttcatgattgagcacatcgtctctacaaccaataaactcgttgag
atttacgaagataaagataatgctcgtaaggatgaaattgcggcgcttggtggtcagact
gctactggtaccaatgtgtttagtgccttttacgacagattgaaagagattcgtgagtat
cacaggcgacatcaatctgcacgtgtcatagatgctgaagaggagtatgagcagatgttt
aaggaggatcccatgcttgatttcagtggagaggaagcatctggccgttacttggatttg
catcaattctacaatatgtacattaattcaaaatttggtaaaccaatggattacgtcgct
tacctgatggtattctcacagccacaaaaaattcctcgcaaacgcaagatgacaaggcag
tacaaagagtacactatcaatatactggagtacctgatctctttctttgaacgaacagag
cctttaaaagatctagatagaatattctcgaaggtaatatctgattttgaagaaaaatgg
gcgattggagaagtggagggatgggagaatgaggggcaggagaatggtcatgtttctcag
tctgacgtgattgatcttgattattatagcacagtggaagagcttatggaattgggtccc
gagaagttgaaagaggccttggctgcactaggactgaaaacaggtggtactgttcaacaa
agagcagagaggctattccttaccaagaacactcctctcgagaagttggatagaaagcat
tttgctaaactaccatgtggttcaaaccagaacggtaatggtgatgtgcagtttcacaag
caagaagatatcaaggaattggccttagtagaagccaagatgaaaaagctctgcgaactg
cttgaagagatcatagtccgaacgaaagaaaatattgtgaagaagcagggaatgactttt
gaagagattgaaaaagagcacgaggaggaagatgaacaggctgaatccgaaagtgatgaa
gaagatcagcctatatacaatcctctaaaattgcctcttggttgggatggaaaaccaata
ccatattggttatataagctccatggtcttggacaggaattcaaatgtgaaatttgtggg
aaccatagttactggggccgtcgagcctttgagagacattttaaagaatggcgtcaccaa
cacggaatgcgctgtcttggtattccaaacacaaagaacttcaatgaaattacatctatt
caggatgctaagaatctctgggaaaaaattcagaaaagacaaggattgcacaagtggcga
ccagacctcgaagaggaatatgaagatcaagagggcaatatatataacaagaaaacatat
gctgatttacagcgtcaagggttgatataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (7)   
   RefSeq(nuc) (5)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (26)   

Download RDF
DBGET integrated database retrieval system