KEGG   Spinacia oleracea (spinach): 110795502
Entry
110795502         CDS       T05137                                 
Name
(RefSeq) general negative regulator of transcription subunit 3 isoform X1
  KO
K12580  CCR4-NOT transcription complex subunit 3
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110795502
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110795502
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110795502
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     110795502
SSDB
Motif
Pfam: Not3 NOT2_3_5_C DUF5965
Other DBs
NCBI-GeneID: 110795502
NCBI-ProteinID: XP_021856208
UniProt: A0A9R0K3B3
Position
1:complement(47707790..47734171)
AA seq 854 aa
MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEADLKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNNVVGELESQIDNFEAEMEGLSVKKGKTRPPRLTHLETSISRHKA
HVMKLELILRLLDNDELSAEHVNDVKDFLEDYLERNQEDFDEFSDVDELYNTLPLDKVEA
LEDLVSMGQPGLAKGGGVASSVLSLKTSSNTSSSVASATVPSSQLTIPIQEQDEINSMDS
NFDSVPKTPPSKTSILSSPNLSIPPTSQTAIANSSTHLPATPSATASVSGSVSGRGILEG
AVPSSPLNLPNVAKEEDAVNLPGRRSSPALTDPAALTRGIGRGSMSSQPAVSVPLSSVGT
VPSSGMTLGAVPLASEVAKRNILGSDDRLASSVVAGRAFSSSGVPGMQWRPGSSFQSQSE
VGQFRGRTEIAPDQREKFLQRLQQVQQQGHSNILGMPSLAGGNSKPFSGQQQNPLLQQLS
SQSSSISSQVGLGLGLQSPGLSTASSAPVHQQAVQQGSLVVAPKDSDDGLAATEDQQQQN
LSEDSAVEMALGSGISKNLMNDDDLKASYVKDVSSGGASGPLTESTQLSRDADLSSGQTL
QSSQPSGSLGVIGRRSILDLGAIGDNIGGTTNSGGVHDLVYNTQMLEAAFYKLPQPKDSE
RAKSYTPRHPAATPPSYPQVQAPIVNNPAFWERLGLDTLGTDTLFFAFYYQPNTYQQYLA
AKELKKQSWRYHRKYYTWFQRHEEPKIATDEYEKGTYVYFDFHLANDDPHQGWCQRIKTD
FKFEYSFLEDELIV
NT seq 2565 nt   +upstreamnt  +downstreamnt
atgggagccagtcgaaagttacagggcgagatcgatcgagttttgaagaaggttcaagaa
ggtgttgacgttttcgatagcatctggaacaaggtctacgataccgataatgctaatcaa
aaagagaagtttgaagctgatttgaagaaggaaattaagaaattgcagaggtatagagac
caaatcaagacatggatacagtccagcgaaattaaggataaaaaggttagtgcatcttat
gagcaggctttggtggatgcccggaagcttattgagcgtgagatggaaaggtttaaaatt
tgcgagaaggaaacaaagacgaaagcattttcaaaagaaggtctaggccagcagcctaaa
actgaccctaaggagaaagcaaaatcagagacaagagattggttgaacaatgtggtagga
gagttagagtctcaaattgataattttgaggctgagatggagggcttatctgtgaagaaa
ggaaagacgagacctcctagactgacacatttggagacttctatatctcgtcacaaggct
catgtaatgaaattagaattgatattgagattactagacaatgatgaattgagtgctgaa
catgtcaatgatgttaaagacttccttgaagattatttggaacgtaatcaggaagatttt
gatgagtttagtgatgttgatgagctctacaacaccttaccattagacaaggtggaagct
cttgaagatctcgtgtcaatgggacaacctggacttgctaagggtggcggtgttgccagc
tcagttctaagtttaaagacatcatcaaatacgtcatcttctgtggcatcggcgactgtt
ccatcctctcaactaactattcctattcaggagcaagatgaaataaattctatggacagt
aattttgattctgttccaaaaactccgccgtctaagactagcatactcagttcccccaat
ctgtcaattccgccaacaagtcagacggctatagcaaactcttctactcatctacctgcc
actccaagtgctacagcttctgtttctgggtcagtttctggtagaggcattctggaaggt
gctgttccttcttctcctttgaatctcccaaatgttgccaaagaagaggatgcagtgaac
ttacctggccgaagatcatcacctgctctcacagaccctgcagctcttactcgaggcatt
ggccggggcagtatgtccagtcaacctgctgttagtgtccctcttagttctgttggtaca
gttcctagcagcggcatgacgcttggtgcagttcctctggcgtcagaggtagcgaagaga
aatattttaggatccgatgacagacttgcaagtagtgttgtcgccggtagagccttttct
tcttctggggttcctggaatgcagtggaggcctggaagctcttttcagagtcaaagtgaa
gtgggacagtttcgtggaagaactgaaattgctcctgatcaacgggaaaagtttcttcag
aggttgcagcaagtacagcagcaaggtcacagcaatattcttggaatgccaagtcttgca
ggtggaaattctaaacccttctcaggacagcagcaaaatccacttcttcagcagttaagt
tctcaaagctcgtctatctcctctcaagttggtcttggtctgggattgcagtctcctgga
ctaagcactgcttcatctgcacctgtccatcagcaggctgtccagcagggatctttagta
gttgctccaaaagattcagatgatggtcttgcagctaccgaggatcagcaacagcagaac
ttatctgaggattcggcagttgaaatggctcttggttctgggatttccaaaaatttgatg
aatgatgatgatcttaaagcttcttatgtgaaggatgtctcaagtggaggtgcatctggt
ccgctaacagaatccacgcaactgtcaagagatgcagatctttcttctggtcaaactttg
caatcaagtcaaccatctggtagccttggagttatcggtcggagaagtatcttagacctt
ggggccattggtgacaacattggcggaacaaccaactctgggggagtgcatgatcttgtg
tacaatacgcagatgcttgaggctgcattctacaagcttcctcagcctaaagattcagaa
cgagcaaagagctatacgcctagacaccctgcagcaactcctccaagctatccgcaagtt
caggcaccaattgtaaacaatcctgctttctgggaacgattgggtcttgataccttgggg
accgataccttgttctttgcattctactatcaaccaaatacatatcaacaatatttggct
gcaaaagagttaaagaaacaatcatggagataccatagaaaatattacacatggtttcag
aggcatgaagaaccaaagattgccactgatgaatacgagaaggggacctatgtctacttt
gattttcatcttgccaacgatgacccgcatcaaggatggtgccagaggattaaaacggac
ttcaaattcgagtatagttttttagaagacgaactaattgtatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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