KEGG   Shewanella oneidensis: SO_1643
Entry
SO_1643           CDS       T00099                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII RnhB
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
son  Shewanella oneidensis
Pathway
son03030  DNA replication
Brite
KEGG Orthology (KO) [BR:son00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SO_1643 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:son03032]
    SO_1643 (rnhB)
Enzymes [BR:son01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     SO_1643 (rnhB)
DNA replication proteins [BR:son03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     SO_1643 (rnhB)
   Elongation factors (archaeal)
     SO_1643 (rnhB)
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: AAN54698
UniProt: Q8EGG1
Position
1725564..1726193
AA seq 209 aa
MAVFKTLTDADIAMFSTSLVAGVDEVGRGPLVGDVVTAAVILDPNRPILGLNDSKKLTEK
RREALFDEICEKALSFHVGRASPAEIDELNILHATMLAMQRAVSGLKLTPALVLVDGNRS
PAFTHQGLSLASHSIIKGDGLIASISAASIIAKVTRDREMDALDAAYPQYGFAKHKGYPT
KAHFEAIAEHGVFDQYRKSFKPVKALLER
NT seq 630 nt   +upstreamnt  +downstreamnt
atggcggtatttaagacgctgactgacgccgatatcgccatgttctcaaccagtttggta
gccggggtggatgaagtcggccgcggccccctcgttggcgatgtggttacagcagcggtg
atcctcgaccctaatcgacctattttgggcttaaatgattccaaaaaactgaccgaaaag
cgccgtgaggccttgtttgatgagatttgtgaaaaagccttaagttttcatgtggggcgg
gccagtcctgcggaaattgatgagctcaatattctgcatgctaccatgcttgccatgcag
cgagcagtgtcagggcttaagctcactccagcgttagtcttggtcgatggcaatcgcagt
ccggcgtttactcaccaagggctgtctttggcgagccatagcataatcaaaggtgatggc
ttgattgccagcattagtgcggcatcgattattgccaaagtgacacgcgatcgggagatg
gatgcccttgatgccgcctatcctcaatatggttttgccaagcataaaggctatcccaca
aaggcgcattttgaggccatcgccgagcatggcgtgttcgaccagtaccgtaaaagtttc
aaacccgtcaaggcattactggagcgttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (21)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (30)   

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