KEGG   Solanum tuberosum (potato): 102593463
Entry
102593463         CDS       T02981                                 
Name
(RefSeq) THO complex subunit 4D
  KO
K12881  THO complex subunit 4
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
sot03015  mRNA surveillance pathway
sot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102593463
  09122 Translation
   03013 Nucleocytoplasmic transport
    102593463
   03015 mRNA surveillance pathway
    102593463
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102593463
   03041 Spliceosome [BR:sot03041]
    102593463
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     102593463
    TREX complex
     102593463
Spliceosome [BR:sot03041]
 Complex C
  Other components
   EJC/TREX
    102593463
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    102593463
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 102593463
NCBI-ProteinID: XP_006346755
UniProt: M1C6C2
Position
Un
AA seq 276 aa
MASLDMTLDDMIKSRRNSEKGGRGQGRARRGRGQGGSVRGGRTTGAPHKGALGVNARPSA
NRIAKSFRRTKNLPWQNGLLEDSLRAAGVSSGLETGTKVYVSNLDVGVTNSDIRELFAEM
GELIRYAIHYDKNGRPSGSAEVVFARRSDAYQALKRYNNVQLDGKPMKIEIVAPKPDIPL
SARVDVGRANGRRTVVMMPGSARGRGGASAANRGSSQRGHGGLGNAPGRGRGRGRGRGRG
GRGRGGRGSKNGVEKSAEDLDKELENYHANADAMQT
NT seq 831 nt   +upstreamnt  +downstreamnt
atggcttccttggatatgactcttgatgatatgataaaaagtaggagaaatagtgagaaa
ggaggtaggggacaaggcagggcccgacgtggaagagggcaaggaggatcagttagaggt
ggaagaacaacaggagctcctcataaaggggcacttggtgtaaatgctcggccatctgcc
aacagaattgccaagtctttccgcagaaccaagaatttgccatggcagaatggcttgctt
gaagatagtcttagagctgcaggggtatcatcagggttagagactggcactaaggtgtat
gtttccaacttggatgtcggagtgacaaattcagatataagggaactcttcgcggagatg
ggtgaactgatacgatatgctatccactatgacaaaaatggacgtccaagtggctcagct
gaggtggttttcgccagaaggagtgatgcatatcaagcacttaaaagatacaacaatgtt
cagttggatgggaaacctatgaagatagaaattgtcgctcccaagccggacattccttta
tcagctcgtgtagatgttggacgagcaaatggaaggaggaccgttgtcatgatgccgggc
tcagctcgtggaagaggtggtgcatctgctgctaatcgtggttcaagtcaaagggggcat
ggtggcttgggtaatgcaccaggacgcggccgcggtcgtggtcgtggtcgtggacgtgga
ggacgcggtcgtggtggtaggggtagtaagaatggcgttgagaagtcagcagaagatctt
gacaaggagctggaaaactatcatgctaatgcagatgctatgcagacctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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