KEGG   Solanum tuberosum (potato): 102596009
Entry
102596009         CDS       T02981                                 
Name
(RefSeq) cell differentiation protein RCD1 homolog
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102596009
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102596009
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     102596009
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 102596009
NCBI-ProteinID: XP_006352520
Position
Un
AA seq 318 aa
MANLPQSLSVGVSSFRGRDGMSSSSSSAGAPVNKDRKMQSAEQLVLDLCNPNLRENALLE
LSKKRELFQDLPPLLWHSFGTISVFLQEIVSIYPVLSPPNLTLAQSNRVCNVLALLQCVA
SHPDTRLLLFNAYIPLYLYPFLNTTSKSTPFEYLRLTSLGVIGALVKVDNTEVISFLVST
EIVPRCLCTMEMGSELSKTVATFIVEKILLDDVGLNYICTTSDRFFELAQVLGNMVGALA
EQPSSRLLKHIIRCYLRLSDEPRACQALKICLPDMLRDDTFSSCLREDPITRRWLQQLLL
NVNGNRVALQAGGFDRMP
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcaaacttacctcagtctctctcagtcggtgtcagcagtttcagaggaagagatggt
atgtcatcatcgtcttctagtgccggagcaccggtcaataaggatcgcaaaatgcaatct
gctgaacagcttgtgcttgatctctgcaaccctaatcttcgtgaaaatgctcttctagaa
ctttccaagaagagggaactcttccaggatttgccccccttattatggcactcgtttggt
actatctctgtatttctacaggagatagtttctatctaccctgttttgtcaccgccaaac
ctgactcttgcacaatccaatagagtttgtaatgtactagcacttcttcagtgtgttgcc
tctcaccctgacaccagattgttgttattcaatgcatatattcctttgtatctgtacccc
tttcttaatacaacaagcaagtcaacaccatttgaatatttgaggcttacaagcttaggt
gttattggtgcccttgtgaaggtagacaacactgaagttatcagttttcttgtttcgaca
gagatagttcctcggtgcttgtgcacgatggagatggggagtgaactatcaaaaacagtt
gcaactttcattgtggaaaaaatccttctagatgatgtgggtctgaattacatatgtacc
acatcggataggttttttgaattagctcaagttttagggaatatggtcggtgcacttgct
gagcagccttcatcaagattgctgaaacacataatcaggtgctatcttcgtttatcagat
gagccaagggcttgtcaggcactgaaaatttgtcttcccgatatgcttagagatgacacc
ttcagcagttgtcttcgtgaggatccaataacgagaaggtggctgcaacaattgctcctt
aacgttaatgggaatcgggttgctctacaagctggaggatttgatcgtatgccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (1)   
   Pfam (1)   
All databases (17)   

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