KEGG   Solanum tuberosum (potato): 102600107
Entry
102600107         CDS       T02981                                 
Symbol
ef-p
Name
(RefSeq) elongation factor 1-alpha
  KO
K03231  elongation factor 1-alpha
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102600107 (ef-p)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sot03019]
    102600107 (ef-p)
   03016 Transfer RNA biogenesis [BR:sot03016]
    102600107 (ef-p)
   03012 Translation factors [BR:sot03012]
    102600107 (ef-p)
   04131 Membrane trafficking [BR:sot04131]
    102600107 (ef-p)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sot04147]
    102600107 (ef-p)
Messenger RNA biogenesis [BR:sot03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Trans-acting binding proteins
     102600107 (ef-p)
Transfer RNA biogenesis [BR:sot03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    102600107 (ef-p)
Translation factors [BR:sot03012]
 Eukaryotic type
  Elongation factors
   102600107 (ef-p)
Membrane trafficking [BR:sot04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Other CMA associated proteins
    102600107 (ef-p)
Exosome [BR:sot04147]
 Exosomal proteins
  Proteins found in most exosomes
   102600107 (ef-p)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 GTP_EFTU_D4 AAA_22 FlpD SRPRB
Other DBs
NCBI-GeneID: 102600107
NCBI-ProteinID: XP_006343452
UniProt: Q2XTC2
Position
Un
AA seq 448 aa
MGKEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
VGYNPDKIPFVPISGFEGDNMIERSTNLDWYKGPTLLDALDQINEPKRPTDKPLRLPLQD
VYKIGGIGTVPVGRVETGVIKPGMVVTFGPTGLTTEVKSVEMHHEALLEALPGDNVGFNV
KNVAVKDLKRGFVASNSKDDPAKGAASFTAQVIIMNHPGQIGNGYAPVLDCHTSHIAVKF
AEILTKIDRRSGKELEKEPKFLKNGDAGMVKMIPTKPMVVETFAEYPPLGRFAVRDMRQT
VAVGVVKNVDKKDPTGAKVTKAAQKKGK
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgggtaaggaaaagattcacatcagtattgtggtcattggccatgtcgactctggaaag
tccactaccactggtcacttgatctacaagcttggtggtattgacaagcgtgttattgag
aggtttgagaaggaagctgctgagatgaacaagaggtcattcaagtatgcctgggtgctt
gacaaacttaaggctgaacgtgagcgtggtatcactattgatattgctttgtggaagttt
gaaaccactaagtactactgcactgtgattgatgcccccggacacagggactttatcaag
aacatgatcactggtacctcccaggctgactgtgctgtcctcattattgactccaccact
ggtggttttgaagctggtatctctaaagatggtcagacacgtgaacatgcattgcttgct
tttacccttggtgtcaaacaaatgatttgctgctgtaacaagatggatgctaccaccccc
aagtactccaaggctaggtatgatgaaatcgtgaaggaagtttcttcctatctcaagaag
gtcggttacaaccctgacaaaatcccatttgtccccatctccggttttgaaggagataac
atgattgagaggtctaccaaccttgactggtacaagggcccaaccctccttgatgctctc
gaccagattaatgagcccaagaggccaacagacaaaccccttcgtcttccacttcaggat
gtttacaagattggtggtattggaactgtcccagttggtcgtgttgagactggtgtgatc
aagcctggtatggttgtgacctttggccctactggtttgacaactgaagtcaagtctgtt
gagatgcaccacgaagctcttctggaggcactccctggtgacaatgttgggttcaatgtt
aagaatgttgctgttaaggatctgaagcgtggttttgttgcctcaaactccaaggatgac
ccagctaagggggcagccagcttcactgcccaggtcatcatcatgaaccatcctggccag
attggaaatggatatgcaccagtgctcgactgccacacttcccacattgctgtcaagttt
gctgagatcttgaccaagattgacaggcgttcaggtaaggaacttgagaaggagcctaag
ttcttgaagaatggtgatgcaggtatggttaagatgattcccaccaagcctatggttgtt
gagacctttgctgagtacccaccattaggtcgttttgctgtgagggacatgaggcaaact
gttgctgttggtgttgtcaagaacgttgacaagaaggacccaactggtgccaaggtcacc
aaggctgcccagaagaagggaaaatga

  All links  
Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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