KEGG   Saprolegnia parasitica: SPRG_12196
Entry
SPRG_12196        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
spar  Saprolegnia parasitica
Pathway
spar03013  Nucleocytoplasmic transport
spar03015  mRNA surveillance pathway
spar03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPRG_12196
  09122 Translation
   03013 Nucleocytoplasmic transport
    SPRG_12196
   03015 mRNA surveillance pathway
    SPRG_12196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_12196
   03041 Spliceosome [BR:spar03041]
    SPRG_12196
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     SPRG_12196
Spliceosome [BR:spar03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    SPRG_12196
SSDB
Motif
Pfam: RRM_1
Other DBs
NCBI-GeneID: 24134177
NCBI-ProteinID: XP_012206553
UniProt: A0A067BW87
Position
Unknown
AA seq 236 aa
MELYASLAEGAGPKKKEYWDRQTYTSLEEQQEAMKQSSTLYVGNLSFFTSETQIYELFSV
VGPVRAVIMGLDRLKKTPCGFCFVEYFNKEHAQACSNFVSGTKLDQRVIRCELDGGFREG
RQYGRGTTGGQVRDDRRSKDDYDPGRGGYGKKVDDVGGHTNHFRRAGGMKRDRTDSVGDF
DSRPSSRRQTSDRRNDVDDVSIDDEKKKEANPRFRERDSDNDDDDDDDAPMEDDTA
NT seq 711 nt   +upstreamnt  +downstreamnt
atggagctgtacgcgagcctcgccgagggcgcgggccccaagaagaaggagtactgggac
cggcagacgtacacgtcgctcgaggagcagcaagaggccatgaagcagtcgagcacgctc
tacgtcggcaacctcagcttctttacgagcgagacgcagatctacgagctcttctcggtc
gtcgggcccgtccgcgccgtcatcatgggcctcgaccgcctcaagaagacgccgtgcggc
ttctgctttgtcgagtattttaacaaggagcacgcgcaggcttgctccaactttgtctcg
ggcaccaagctcgaccaacgcgtcattcgctgcgaactcgacggcggcttccgcgaaggc
cgtcagtatggccgtggcacgaccggcggccaagtccgcgacgaccgccgctccaaggac
gactacgacccgggtcgtggcggctacggcaagaaggtcgacgacgtcggtggccacacc
aaccacttccgccgcgccggcggcatgaagcgcgatcgcaccgacagcgtcggtgacttt
gactcgcgtccttcgtcgcgccgccagaccagtgaccggcgcaacgacgtcgacgatgtc
agcatcgacgacgagaagaagaaggaggccaacccacgcttccgcgagcgcgacagcgac
aacgacgacgacgacgacgacgacgcgcccatggaggacgacacggcgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (22)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (37)   

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