KEGG   Shewanella putrefaciens CN-32: Sputcn32_2741
Entry
Sputcn32_2741     CDS       T00513                                 
Name
(GenBank) DNA polymerase III chi subunit, HolC
  KO
K02339  DNA polymerase III subunit chi [EC:2.7.7.7]
Organism
spc  Shewanella putrefaciens CN-32
Pathway
spc03030  DNA replication
spc03430  Mismatch repair
spc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Sputcn32_2741
   03430 Mismatch repair
    Sputcn32_2741
   03440 Homologous recombination
    Sputcn32_2741
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spc03032]
    Sputcn32_2741
   03400 DNA repair and recombination proteins [BR:spc03400]
    Sputcn32_2741
Enzymes [BR:spc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Sputcn32_2741
DNA replication proteins [BR:spc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Sputcn32_2741
DNA repair and recombination proteins [BR:spc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Sputcn32_2741
SSDB
Motif
Pfam: DNA_pol3_chi
Other DBs
NCBI-ProteinID: ABP76460
UniProt: A4Y927
Position
3172126..3172656
AA seq 176 aa
MQGIEIMTQALFYLMPPVAQSGHIAIQSAISTVANTNAALGAMHLFACQLAQQAYIKQQL
VYIHCQDKNLALEIDELLWQFEPTAFVPHNLKGEGPITGAPVEIGFDRLGANKSRQLLIN
IADQAPPFAVNFGQIIDFVANDDQHKAVARERYRQYRDLGIELTTHNLATHPLNLV
NT seq 531 nt   +upstreamnt  +downstreamnt
atgcaaggcattgaaattatgactcaagcgctgttttatctgatgccaccagtggcacaa
tctggtcatatcgcgatccagtcagccataagcactgtagccaataccaatgcggcttta
ggagcaatgcacctttttgcatgtcaattagctcagcaagcttatattaagcaacaatta
gtctatattcattgtcaagacaaaaacttagctttagagattgatgaattattatggcaa
tttgagccaacagcatttgtacctcacaacttgaaaggtgaaggacctatcactggtgcc
ccagttgaaataggttttgaccgccttggggccaataaaagtcgtcaacttctgattaat
attgcagaccaagcccccccatttgcggtaaactttggtcaaatcatcgattttgttgcc
aatgacgatcagcataaagccgttgcccgtgaacgctataggcaatatcgcgacctaggg
atcgaattaacgacccataatttagcaacacatccacttaatttagtttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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