KEGG T00413: SPD

Streptococcus pneumoniae D39 (virulent serotype 2): SPD_0512

Entry

SPD_0512          CDS       T00413

Symbol

pnp

Name

(GenBank) polyribonucleotide nucleotidyltransferase

K00962

polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]

Organism

spd Streptococcus pneumoniae D39 (virulent serotype 2)

Pathway

spd03018

RNA degradation

Brite

KEGG Orthology (KO) [BR:spd00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPD_0512 (pnp)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spd03019]
    SPD_0512 (pnp)
   03016 Transfer RNA biogenesis [BR:spd03016]
    SPD_0512 (pnp)
Enzymes [BR:spd01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     SPD_0512 (pnp)
Messenger RNA biogenesis [BR:spd03019]
Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     SPD_0512 (pnp)
Transfer RNA biogenesis [BR:spd03016]
Prokaryotic type
  tRNA degradation factors
   SPD_0512 (pnp)

SSDB

Motif

Pfam:

RNase_PH RNase_PH_C S1 PNPase KH_1 KH_2 S1_2 PCB_OB SPATA25 DUF4404

Other DBs

NCBI-ProteinID:

ABJ54028

UniProt:

Q04LT4

Position

523227..525554

AA seq 775 aa
MSSSKTSSVSYFYFAFDVLGILIFVGKAYNFINPKGIKMAKQVFQTTFAGRELIVETGQV
AKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVNYEEKMYAAGKFPGGFMKREGRP
STDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDENASAPMAAMFGSSLALSISDIP
FDGPIAGVQVGYVDGQIIINPSQEQAEQSLLELTVAGTKHAINMVESGAKELSEEIMLEA
LLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDAELQAEIIAAYNSDLQKAVQVEEKL
AREAATQAVKDQVTAVYEEKYANHEEFDRIMRDVAEILEQMEHAEVRRLITEDKVRPDGR
KVDEIRPLDAVVDFLPRVHGSGLFTRGQTQALSVLTLAPMGETQIIDGLDPEYKKRFMHH
YNFPQYSVGETGRYGAPGRREIGHGALGERALAQVLPSLEEFPYAIRLVAEVLESNGSSS
QASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTVLTDIQGLEDHFGDMDFKVAGTR
DGITALQMDIKIQGITAEILTEALAQAKKARFEILDVIEATIPEVRPELAPTAPKIDTIK
IDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSIYSSDQDAINRAKEIIAGLVREA
KVDEVYRAKVVRIEKFGAFVNLFDKTDALVHISEMAWTRTNRVEDLVEIGDEVDVKVIKI
DEKGRIDASMKALLPRPPKPEHDEKGEKSERPHRPRHQKDYKPKKEFTETPKDSE

NT seq 2328 nt +upstreamnt +downstreamnt
ttgtcttcatcgaagacttcgtcagtttcctatttttactttgcttttgacgtccttggt
atcttgatctttgtaggcaaggcgtataatttcatcaatccaaaggggattaaaatggca
aaacaagtgtttcaaacgacttttgcgggtcgtgagttaattgtagaaactggtcaggtt
gctaagcaagcaaatggctctgttgtcgtacgttacggtgagtcaactgtcttgactgct
gccgttatgtctaagaaaatggcaactggggatttcttcccactccaagtcaactacgaa
gaaaaaatgtatgcggctgggaagtttcctggtggctttatgaaacgtgaaggacgtcct
tcaacagatgcgaccttgacagcgcgtttgattgaccgtccgattcgtcctatgtttgcg
gaaggtttccgtaatgaagtccaagtcatcaatacagtgctttcttatgatgaaaatgca
tctgcaccaatggctgctatgtttggttcatctttggcactgtctatttcagatattcca
tttgacggaccaattgctggggtacaagtgggatatgtagatggccaaatcatcatcaac
ccaagtcaagaacaagcagagcaatctcttcttgaattgacagtagctggaaccaagcac
gctatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgttggaagcg
cttcttaaagggcacgaagctgtcaaagaattgattgccttccaagaagaaatcgttgct
gctgtcggtaaagaaaaagcagaagtggaattgcttcacgtggatgctgaattgcaagct
gaaatcattgcagcctacaacagtgacctccaaaaggcagttcaagtagaagagaaattg
gcccgtgaagctgcaactcaagcagtgaaagaccaagtgactgccgtttacgaagaaaaa
tatgcgaaccacgaagaatttgaccgtattatgcgtgatgtggctgaaatcttggaacaa
atggaacacgcagaagtgcgacgtttaattacagaagacaaggtgcgtcctgatggtcgt
aaggtcgatgaaatccgtcctttggatgcggttgttgacttccttcctcgtgtacatggt
tcaggtctctttactcgtgggcaaactcaagctctttcagtcttgaccttggctccgatg
ggagaaactcaaatcattgatggtttggatccagagtacaagaaacgctttatgcaccac
tataacttccctcaatattctgtaggggaaacaggtcgttacggtgcgccaggtcgtcgt
gaaatcggtcacggtgcccttggtgagcgtgctcttgctcaagtcttgccaagcttggaa
gaattcccatacgctatccgtctagtagcagaagttttggaatcaaacggttcttcatct
caagcttctatctgtgcgggaactcttgcccttatggctggtggtgtgccaatcaaggcg
ccagtagctggtattgctatgggacttatctcagatggaaataactacacagtattgaca
gatatccaaggtttggaagatcactttggagatatggacttcaaggttgcaggtactcgt
gatgggattacagcccttcaaatggatatcaagattcaagggattactgcagaaatcttg
acggaggctcttgctcaagccaagaaagcgcgttttgaaatccttgatgtcattgaagca
accattccagaagttcgtccagaattggctccaactgctccgaaaattgatacgatcaag
attgatgtggacaagattaagattgtcatcggtaagggtggagaaaccatcgacaagatt
atcgctgaaacaggtgttaagattgatatagacgaagaaggaaatgtgtctatctactct
agtgaccaagatgctattaaccgtgccaaagaaattattgctggtttggttcgtgaagcc
aaagtggatgaagtttaccgtgctaaagtcgttcgtatcgagaaatttggtgcctttgtt
aacctctttgataagacagatgcccttgttcatatctctgagatggcttggactcgtacc
aatcgtgtagaggatttggtagaaatcggggatgaagttgatgttaaggttatcaaaatt
gatgaaaaaggccgtatcgatgcctctatgaaggctcttctacctcgtccgccaaaacct
gagcatgatgaaaaaggtgaaaagtctgagcgccctcaccgcccacgtcatcaaaaggat
tacaaacctaagaaagaatttacagaaacaccaaaagattcagaataa

All links

Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

Download RDF

DBGET integrated database retrieval system