KEGG   Solanum pennellii: 107008462
Entry
107008462         CDS       T04130                                 
Name
(RefSeq) ATP-dependent DNA helicase Q-like SIM isoform X2
  KO
K10900  werner syndrome ATP-dependent helicase [EC:5.6.2.4]
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spen03032]
    107008462
   03400 DNA repair and recombination proteins [BR:spen03400]
    107008462
Enzymes [BR:spen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107008462
DNA replication proteins [BR:spen03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    107008462
DNA repair and recombination proteins [BR:spen03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecQ family DNA helicases
     107008462
SSDB
Motif
Pfam: DEAD Helicase_C RecQ_Zn_bind ResIII UBA
Other DBs
NCBI-GeneID: 107008462
NCBI-ProteinID: XP_015062996
Position
1:100162003..100180632
AA seq 877 aa
MDPDRVVAELVGMGFELSDITDAVEVVGPSIDSAIDYLLDDSRRNTASASTSTACFTSCA
DMLGKRGSSSSSCYAGKIRQSSINEFIKSESRPKRSKTINKLNMSQSEVFQRDTGGQNVH
PPLEDADLHIATEKAISSSYCKDEDIGPDWQTKVKTLLQKHFGFPLLKDFQKDALEAWLS
HQDCLVLAATGSGKSLCFQIPALLTGKVVIVISPLISLMHDQCLKLAKHGVSACFLGSGQ
TDKSVEQKAMAGMYSIIYVCPETILRLIKPLQSLAESRGIALFAVDEVHCVSKWGHDFRP
DYRRLSVLRESFSMDTMKFLKFDIPIMALTATATTRVREDILQSLHMSKATKIVLTSFFR
PNLRFLVKHSKTSSLASYKKDFHELISIYSRKGKSSSKNKLMSTNLEENSESSDNASNGR
MDECNGINEVNVDDVEGYAVSDSDNEVSSPGRYGLDSSKDRQLSVEYLEDECDVVQDVDD
LDVSCGEFSGKLPLKGCSGFLLHKTPDLANDPKERAKLRHKPLEDGPTIIYAPTRKETLS
ISKFLSKFGIKAAAYNAKLPKSHLRQVHKEFHENTLQVIVATIAFGMGIDKLNVRRIIHY
GWPQSLEAYYQEAGRAGRDGKVAECVLYANLSRIPTLLPSQRSEEQTKQAYKMLSDCFRY
GMNTSCCRAKTIVEYFGEHFLLEKCLVCDICIKGPPERQNLKAEAMIFLQVVSTHCRNFA
DISYGGYEGRLGERPNIKALVSRIREQYQQFSASDLLWWRGLARLLEVEGFIREGDDMTR
VQIKYPEVTVRGRQFLNSETEQPFHVYPEADMLLSITSPKSFSSFAEWGEGWADPEIRRQ
RLQRKRTWKSPRKRKSRKRQPDSNTVRGRLTAKLSKK
NT seq 2634 nt   +upstreamnt  +downstreamnt
atggacccagaccgagttgttgctgaattggttggaatgggatttgagttatctgatatt
acagatgctgtagaagttgtgggtccatcaattgatagtgcgattgattatctactcgat
gattctcgaagaaacactgcaagtgcatcaactagtactgcatgtttcaccagttgtgct
gatatgctgggaaaaagaggctcctcttcttcttcttgttatgcaggaaaaatacggcaa
tcgagcataaacgaattcattaaatcagaaagtagacctaaaagaagcaagacaataaat
aaattgaatatgtctcaatcagaagtcttccaaagagatacgggaggccaaaatgtgcat
ccccctctagaggatgctgatctccacattgcaactgaaaaagctatatcatcatcttat
tgcaaagatgaagatattggaccagattggcaaacgaaggtcaagactttgttgcagaaa
cactttggatttccattgttgaaggattttcagaaagatgctctggaagcttggttatct
caccaagactgtcttgttcttgcagcaacaggatcagggaaatctttgtgttttcagatt
ccggcattgctgactgggaaggttgtcatagttatatcaccgttgattagcttgatgcac
gatcagtgtttgaagttagcaaaacatggtgtttctgcttgcttccttggatctggtcaa
actgataaaagtgttgaacaaaaagcaatggcaggcatgtatagtatcatttatgtatgc
cctgagacaattctaagactcataaaacccctccaaagccttgctgaaagtcgaggaatt
gctctatttgcagtcgatgaagttcattgtgtttctaagtggggtcatgattttcgacca
gattacaggcgattatctgttttgagagagagctttagcatggataccatgaagtttctg
aagtttgacattccgatcatggcactgactgctactgcaactactcgtgttcgagaagac
attctgcagtcattgcacatgtcaaaggcgacaaaaattgttctcacttcgtttttccgg
ccaaatctccgatttttagtgaaacactctaaaacatcatccttagcatcctacaagaag
gattttcatgaattgataagcatttattccagaaaaggaaagtcttcctcgaaaaataag
ttaatgtctacaaatttagaggagaactctgaaagctctgataatgcttccaatggtcgc
atggatgaatgtaatgggatcaatgaggttaatgtagacgacgttgaggggtatgctgtt
tctgacagtgacaatgaagtatcttctcctgggagatatggtttagattcatcgaaggat
agacaactgtctgttgagtatctggaagatgagtgtgatgttgtgcaagatgtggatgat
ttggatgtttcttgtggtgaatttagtggaaagctaccactgaaaggttgtagtggtttt
ctgttgcacaaaactcctgatctggccaatgatccaaaagaaagagccaagcttcgacac
aaaccgttggaggatggaccaacaataatctatgccccaactaggaaagaaacattaagt
atatcaaaatttctttctaaatttgggatcaaggctgctgcttacaatgctaagttgcca
aaatcacatctgaggcaggtgcataaggaatttcacgagaacactctgcaggtcattgtc
gcaacaattgcctttgggatgggcattgacaagttgaacgtgcgaaggatcatccactat
ggttggccccagagtctggaggcttattatcaagaggctggtcgagctggtcgggatgga
aaagtagcagagtgtgttctgtatgcaaacttgtcaagaatacctacgcttctaccaagt
caaagaagtgaagagcagacaaaacaagcatataagatgttatctgattgctttagatat
ggaatgaacacttcttgctgtagagccaagacaattgtggagtactttggcgagcacttt
cttttggagaaatgtctcgtgtgtgatatatgcatcaaaggtccacctgaaagacagaat
ttaaaggctgaggcaatgatcttcttgcaagttgtatctactcattgtagaaattttgca
gacatctcctatggtggttatgaagggagacttggcgagaggccaaacatcaaggcttta
gtcagcagaataagggaacagtatcaacaatttagtgcaagtgacctcttgtggtggaga
ggtcttgctcgactgttggaagttgaaggatttattagggagggcgatgacatgactcgt
gtgcagataaaatatccagaagtaacagtacgtggaaggcagttcctgaattctgaaaca
gagcagccattccatgtttatcccgaagcagatatgttgctttccattacaagccccaag
tccttttccagttttgctgaatggggagaaggttgggctgatcccgagatccgtcgccaa
cgcttgcaaagaaagcgaacttggaaatctccaagaaaacgaaaatcacgtaaacgtcag
cctgactctaacacggttcgaggaagattgactgccaagctgtcaaaaaagtga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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