KEGG   Solanum pennellii: 107012350
Entry
107012350         CDS       T04130                                 
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 7-like
  KO
K16911  ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]
Organism
spen  Solanum pennellii
Brite
KEGG Orthology (KO) [BR:spen00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:spen03009]
    107012350
   03036 Chromosome and associated proteins [BR:spen03036]
    107012350
Enzymes [BR:spen01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     107012350
Ribosome biogenesis [BR:spen03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    107012350
Chromosome and associated proteins [BR:spen03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    107012350
SSDB
Motif
Pfam: DEAD GUCT Helicase_C ResIII FlpD CMS1
Other DBs
NCBI-GeneID: 107012350
NCBI-ProteinID: XP_015067656
Position
3:complement(1626380..1631655)
AA seq 681 aa
MPALVESETMASEDLKELKKSGNGSSADSHKRSKKTKIDYGSDSEELKKSKKKDKKRKAL
SLDDQENGNSEVLESINLSEDEKKKKKKKKKKEEDEAKLVEEDSEEKEEDPNALSNFRIS
VPLREALIAKGINALFPIQAMTFDTILDGSDLVGRARTGQGKTLAFVLPILESLINGPTK
VSRKTGYGRAPSVLVLLPTRELALQVFADFEVYGGAVGLTSCCLYGNSPMGQQQVQLKRG
VDIVVGTPGRIKDHIERGNIDFRSLKFRVLDEVDEMLKIGFVDDVEFILGKVEDASQVQT
LLFSATLPSWVKHISSKFLKPDKKTADLVGDEKMKASKNVRHIIIPCSSSARSQLIPDII
RCYSSGGRTIIFTETRGYASELAGILPGARALHGDIQQSQREITLSGFRSGKFLTLVATN
VAARGLDIDNVQLIIQCEPPRDVEAYIHRSGRTGRAGNTGVAVMLYDPKKSNISKIERES
GVKFEHLSAPQPADVAKAAGKEAAEAIAEISDSVIPAFKAAAEELLHTSELSPAELLAKA
LAKAAGYSEIKSRSLLSSMENCVTLLLECGRPIFSPSFAYNVLRGFLTEDKVESIKGLTL
TADGKGAVFDVSADDLDTFLAGKNAQGVSLEVVKELPRLQEKDQQRGGRFGGGRGDRRNG
GRFSGGRGGGGRGYGNFGRRW
NT seq 2046 nt   +upstreamnt  +downstreamnt
atgcctgcacttgttgaaagtgaaacaatggcgtctgaagatttgaaggagctgaagaag
agcggaaatgggtcatccgccgactcccataagaggtcgaagaagaccaagattgattat
gggtctgattcagaggagctaaagaagagtaagaagaaagataagaagcgtaaagcttta
agcttggatgatcaggagaatggaaattcggaggttttggaatcgattaatctgagtgag
gatgaaaagaagaagaagaaaaagaagaagaaaaaggaggaggatgaggctaaattggtg
gaggaggatagtgaggagaaagaggaggatcctaatgccttgtctaattttaggatttca
gtgccactgagagaagctttgattgccaaagggataaatgcgctgtttcctattcaagct
atgacttttgataccatattggatgggtctgacttggttggtcgagctcgcactggtcag
ggtaaaacattagcctttgtgttgcccatattggagtccctgataaatggacctactaaa
gtatcacggaaaacagggtatgggagggctccaagtgtcctagtgcttttacctactagg
gagttggcacttcaggtgtttgctgactttgaagtgtatggtggggctgtggggctaact
tcatgttgtttatatggaaattcacccatgggacaacaacaagttcaactgaaaagagga
gttgatatcgtcgtaggtactcctggaagaattaaggaccacatcgaaagaggaaatatt
gatttcaggtccctaaagttccgtgttcttgatgaagttgatgaaatgttgaaaattggt
tttgttgatgatgttgaatttatattaggcaaggtagaagatgcaagccaagttcaaaca
cttcttttcagtgcaactttgccgagctgggtgaagcatatatcttcgaagtttctcaaa
cctgataagaaaacagctgatcttgttggtgatgagaaaatgaaggcaagcaagaatgtg
aggcatattattataccatgctctagttcagccagatctcagctgattcctgatataatt
cgctgctacagcagtggtggacgcacaattattttcactgagacaaggggttatgcttcg
gagctagctggcatattgcctggggcacgtgctttgcatggagacatacaacaatcccag
cgtgagattacactttctggattcagatcaggaaagttccttacattagtggccacaaat
gtagcagcccgtggattggatatcgacaacgttcagttaattattcagtgtgagcctcca
cgtgatgttgaagcgtatattcatcgatcaggcaggacaggacgagcaggaaatactggt
gttgctgtaatgctttacgatcctaagaagtccaacatctctaagattgaaagagaatct
ggtgtcaagttcgagcatctgtctgctccacagccagctgatgttgccaaagctgctggg
aaagaagcagcagaagcaattgctgaaatttctgatagtgtaatacctgctttcaaggct
gctgcagaggaacttctacatacctctgaactatcaccagctgaattgcttgcgaaggca
cttgccaaggcagctggctactctgagatcaagagtcgttcgcttctttcttccatggag
aactgtgttactctacttcttgagtgcgggaggcccatattttcaccttcctttgcctat
aatgttttgcgggggttcctaactgaggacaaggttgaatcaatcaaaggtcttactttg
acagcagatggaaagggcgcagtttttgatgtatctgctgatgacctggacacatttcta
gctgggaagaacgcacaaggtgtaagcttagaagtagtaaaagaactgccccggttgcaa
gagaaagatcagcagagaggtggaagatttggtggtggtcgcggtgacaggagaaatgga
ggtcgattttctggaggcagaggtggtggtgggagaggttatggaaactttggccgtaga
tggtga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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